| Protein: | SEH1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 349 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SEH1.
| Description | E-value | Query Range |
Subject Range |
|
|
5.0E-97 | [4..345] | [1153..1451] |
|
|
1.0E-96 | [4..347] | [878..1178] |
|
Region A: Residues: [1-349] |
1 11 21 31 41 51
| | | | | |
1 MQPFDSGHDD LVHDVVYDFY GRHVATCSSD QHIKVFKLDK DTSNWELSDS WRAHDSSIVA 60
61 IDWASPEYGR IIASASYDKT VKLWEEDPDQ EECSGRRWNK LCTLNDSKGS LYSVKFAPAH 120
121 LGLKLACLGN DGILRLYDAL EPSDLRSWTL TSEMKVLSIP PANHLQSDFC LSWCPSRFSP 180
181 EKLAVSALEQ AIIYQRGKDG KLHVAAKLPG HKSLIRSISW APSIGRWYQL IATGCKDGRI 240
241 RIFKITEKLS PLASEESLTN SNMFDNSADV DMDAQGRSDS NTEEKAELQS NLQVELLSEH 300
301 DDHNGEVWSV SWNLTGTILS SAGDDGKVRL WKATYSNEFK CMSVITAQQ
|
| Detection Method: |  |
| Confidence: | 95.612477 |
| Match: | 1erjA_ |
| Description: | Tup1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.2778252170547 | bayes_pls_golite062009 |
| snoRNA binding | 1.61553185503007 | bayes_pls_golite062009 |
| protein binding | 1.24173112731149 | bayes_pls_golite062009 |
| transporter activity | 1.21549336905926 | bayes_pls_golite062009 |
| protein transporter activity | 0.964340340346761 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.734793983890004 | bayes_pls_golite062009 |
| nucleic acid binding | 0.693814013902061 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.359536347486199 | bayes_pls_golite062009 |
| receptor activity | 0.314900439093911 | bayes_pls_golite062009 |
| transcription regulator activity | 0.190100099674138 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.168317261786777 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.132660456600365 | bayes_pls_golite062009 |
| kinase activity | 0.127621956173205 | bayes_pls_golite062009 |
| 0.0248988265652406 | bayes_pls_golite062009 | |
| nucleoside-triphosphatase activity | 0.00585398682921312 | bayes_pls_golite062009 |
