| Protein: | RPN14 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 417 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPN14.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [3..413] | [842..1247] |
|
|
0.0 | [3..415] | [907..1314] |
|
Region A: Residues: [1-417] |
1 11 21 31 41 51
| | | | | |
1 MTKTITVAHI QYDFKAVLEE NDENDDEFYI NVDKNLNEIK EHKIVVLGNS RGVDAGKGNT 60
61 FEKVGSHLYK ARLDGHDFLF NTIIRDGSKM LKRADYTAVD TAKLQMRRFI LGTTEGDIKV 120
121 LDSNFNLQRE IDQAHVSEIT KLKFFPSGEA LISSSQDMQL KIWSVKDGSN PRTLIGHRAT 180
181 VTDIAIIDRG RNVLSASLDG TIRLWECGTG TTIHTFNRKE NPHDGVNSIA LFVGTDRQLH 240
241 EISTSKKNNL EFGTYGKYVI AGHVSGVITV HNVFSKEQTI QLPSKFTCSC NSLTVDGNNA 300
301 NYIYAGYENG MLAQWDLRSP ECPVGEFLIN EGTPINNVYF AAGALFVSSG FDTSIKLDII 360
361 SDPESERPAI EFETPTFLVS NDDEVSQFCY VSDDESNGEV LEVGKNNFCA LYNLSNP
|
| Detection Method: |  |
| Confidence: | 126.68867 |
| Match: | 1erjA_ |
| Description: | Tup1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.2778252170547 | bayes_pls_golite062009 |
| protein binding | 1.42618832381942 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 1.27579156500929 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 1.25374976623953 | bayes_pls_golite062009 |
| nucleic acid binding | 0.693814013902061 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 0.372795124253564 | bayes_pls_golite062009 |
| transcription regulator activity | 0.190100099674138 | bayes_pls_golite062009 |
|
Region A: Residues: [358-417] |
1 11 21 31 41 51
| | | | | |
1 DIISDPESER PAIEFETPTF LVSNDDEVSQ FCYVSDDESN GEVLEVGKNN FCALYNLSNP 60
61
|
| Detection Method: | |
| Confidence: | 65.39794 |
| Match: | 1p22A |
| Description: | F-box/WD-repeat protein 1 (beta-TRCP1) |
Matching Structure (courtesy of the PDB): |
|
