| Protein: | IRC5 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 778 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IRC5.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [22..770] | [15..703] |
|
|
0.0 | [18..749] | [413..1109] |
|
|
0.0 | [34..758] | [15..736] |
|
|
0.0 | [45..775] | [2..794] |
|
|
0.0 | [34..777] | [362..1096] |
|
Region A: Residues: [1-68] |
1 11 21 31 41 51
| | | | | |
1 MSRCSNAALM TVVEDAVGAR VAARTRNMSN GVNYREKEVN DLTADISDSD SDLDSEDNKH 60
61 GKGDNDTA
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [69-162] |
1 11 21 31 41 51
| | | | | |
1 PIWLQDDVHS DEDIQLDSED DSDTEAVQAQ VVDKLAKDTK SEQKSLDDEL SEMDTKTVSL 60
61 KLKKLNEFVR QSQVYSSIIA DTLLHRSNEV ANAN
|
| Detection Method: | |
| Confidence: | 25.66807 |
| Match: | 1gm5A_ |
| Description: | RecG, N-terminal domain; RecG "wedge" domain; RecG helicase domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [163-422] |
1 11 21 31 41 51
| | | | | |
1 TKDNSNSDDE EHSSKKRKTK KKSITDFFKK QKKNEDTTTQ NGAPDDAAIK QPRLLKNCIL 60
61 KPYQLEGLNW LITLYENGLN GILADEMGLG KTVQSIALLA FIYEMDTKGP FLVTAPLSTL 120
121 DNWMNEFAKF APDLPVLKYY GTNGYKERSA KLKNFFKQHG GTGIVITSYE IILRDTDLIM 180
181 SQNWKFLIVD EGHRLKNINC RLIKELKKIN TSNRLLLTGT PLQNNLAELW SLLNFIMPDI 240
241 FADFEIFNKW FDFDSLNLGS
|
| Detection Method: | |
| Confidence: | 25.66807 |
| Match: | 1gm5A_ |
| Description: | RecG, N-terminal domain; RecG "wedge" domain; RecG helicase domain |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [423-478] |
1 11 21 31 41 51
| | | | | |
1 GSNSEALNKL INDELQKNLI SNLHTILKPF LLRRLKKVVL ANILPPKREY IINCPM
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [479-778] |
1 11 21 31 41 51
| | | | | |
1 TSAQEKFYKA GLNGKLKKTM FKELIKDFFT LNDEYIGHVS NRSIRDFINY KLSGNETSNT 60
61 DNKINPTLLQ MDKLYKKNLQ MEISNKKLQN MMMQLRQIID STFLFYFPYL HPEDLTLETL 120
121 LKTSGKLQIL QKLIPPLISE GHKVLIYSQF VNMLDLIEDW CDLNSFATFR IDGSVNNETR 180
181 KDQLEKFNSS KDKHNIFLLS TRAAGLGINL VGADTVVLFD SDWNPQVDLQ AMDRCHRIGQ 240
241 ESPVIVYRLC CDNTIEHVIL TRAANKRNLE RMVIQMGKFN NLKKLALNEG FFFEGKQSGC 300
301
|
| Detection Method: | |
| Confidence: | 11.0 |
| Match: | 1hv8A_ |
| Description: | Putative DEAD box RNA helicase |
Matching Structure (courtesy of the PDB): |
|
