Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YFL052W.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..465] | [1..470] |
|
|
0.0 | [1..465] | [1..470] |
|
Region A: Residues: [1-43] |
1 11 21 31 41 51
| | | | | |
1 MARNRQACDC CCIRRVKCDR KKPCKCCLQH NLQCTYLRPL KKR
|
| Detection Method: |  |
| Confidence: | 36.221849 |
| Match: | 1d66A_ |
| Description: | Gal4; CD2-Gal4 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.56444258780502 | bayes_pls_golite062009 |
| DNA binding | 4.26146437716972 | bayes_pls_golite062009 |
| nucleic acid binding | 4.17369933547911 | bayes_pls_golite062009 |
| transcription factor activity | 3.049435548132 | bayes_pls_golite062009 |
| binding | 2.91929847152301 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.03201524223606 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.87955444697212 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.86200506906385 | bayes_pls_golite062009 |
| transcription activator activity | 0.915626626047549 | bayes_pls_golite062009 |
|
Region A: Residues: [44-350] |
1 11 21 31 41 51
| | | | | |
1 GPKPVKVRNL KKVDDVQVFS KSSSGGIMKV PKALIDQCLR LYNDKLYVIW PLLCYDDLYE 60
61 LLEKRYDETC VYWFLVSLSA ATLSDLQTEI ESEGGVTFTG IQLSSFCMSS RQEFDDFNGS 120
121 DIFKIMTYYC LNRCYAQMSN SRTSYRLSCE AVGLIKLAGF HREETLKLLP FDEQQLGRKV 180
181 YYLLLLTERY FSVYTHCATS LDTTIAPPQP ENVTDPRLSL DSFLEMIRVF TVPGKCFFDA 240
241 LATDSANVTC TEDSLKKIWR ELHTVPLEIE PWSYGYVDIS FSRHWIRTLA WKLVLQISGM 300
301 RISFLSN
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [351-465] |
1 11 21 31 41 51
| | | | | |
1 SKNTHIPVEI ARDMLEDTFL IPKNLYAVHG PGISVKALEI ADALVDVVNQ YDQNAESEAW 60
61 NFLFDISKFV FSLKHCDSTL VDKFTTKCQC ALITLPLSNP LESTDGSKED VDALP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.677 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.555 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.584 | a.24.4 | Hemerythrin |
| View | Download | 0.745 | e.20.1 | Heat shock protein 70kD (HSP70), C-terminal substrate-binding fragment |
| View | Download | 0.586 | a.8.2 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
| View | Download | 0.489 | e.20.1 | Heat shock protein 70kD (HSP70), C-terminal substrate-binding fragment |
| View | Download | 0.457 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.446 | a.64.1 | Saposin |
| View | Download | 0.445 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.437 | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.431 | a.24.4 | Hemerythrin |
| View | Download | 0.415 | a.24.3 | Cytochromes |
| View | Download | 0.405 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.398 | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.395 | e.20.1 | Heat shock protein 70kD (HSP70), C-terminal substrate-binding fragment |
| View | Download | 0.373 | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.370 | a.8.2 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
| View | Download | 0.369 | a.24.4 | Hemerythrin |
| View | Download | 0.366 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.359 | a.4.1 | Homeodomain-like |
| View | Download | 0.358 | a.24.4 | Hemerythrin |
| View | Download | 0.350 | a.8.2 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
| View | Download | 0.346 | a.8.2 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
| View | Download | 0.340 | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
| View | Download | 0.334 | a.64.1 | Saposin |
| View | Download | 0.334 | a.118.8 | TPR-like |
| View | Download | 0.333 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.324 | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.305 | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.300 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.289 | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.287 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.284 | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.272 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.271 | a.90.1 | Transcription factor STAT-4 N-domain |
| View | Download | 0.268 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.267 | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.267 | d.58.26 | GHMP Kinase, C-terminal domain |
| View | Download | 0.266 | c.78.2 | Aspartate/glutamate racemase |
| View | Download | 0.266 | a.81.1 | N-terminal domain of DnaB helicase |
| View | Download | 0.266 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.265 | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.264 | a.69.3 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |
| View | Download | 0.263 | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.263 | a.8.2 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
| View | Download | 0.259 | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.258 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.254 | e.20.1 | Heat shock protein 70kD (HSP70), C-terminal substrate-binding fragment |
| View | Download | 0.254 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.254 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.245 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.240 | a.4.1 | Homeodomain-like |
| View | Download | 0.239 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.238 | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.238 | d.58.26 | GHMP Kinase, C-terminal domain |
| View | Download | 0.237 | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.236 | a.24.4 | Hemerythrin |
| View | Download | 0.236 | a.69.3 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |
| View | Download | 0.236 | a.24.4 | Hemerythrin |
| View | Download | 0.235 | c.78.2 | Aspartate/glutamate racemase |
| View | Download | 0.234 | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.230 | a.141.1 | Frizzled cystein-rich domain |
| View | Download | 0.228 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.227 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.224 | a.118.8 | TPR-like |
| View | Download | 0.223 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.223 | d.8.1 | Urease, gamma-subunit |
| View | Download | 0.223 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.221 | a.8.2 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
| View | Download | 0.219 | a.24.11 | Bacterial GAP domain |
| View | Download | 0.218 | i.11.1 | Computational models partly based on NMR data |
| View | Download | 0.213 | a.24.3 | Cytochromes |
| View | Download | 0.212 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.210 | a.26.1 | 4-helical cytokines |
| View | Download | 0.210 | a.24.4 | Hemerythrin |
| View | Download | 0.210 | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.209 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.207 | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
| View | Download | 0.201 | a.24.4 | Hemerythrin |
| View | Download | 0.201 | a.74.1 | Cyclin-like |
|
Region A: Residues: [315-465] |
1 11 21 31 41 51
| | | | | |
1 WSYGYVDISF SRHWIRTLAW KLVLQISGMR ISFLSNSKNT HIPVEIARDM LEDTFLIPKN 60
61 LYAVHGPGIS VKALEIADAL VDVVNQYDQN AESEAWNFLF DISKFVFSLK HCDSTLVDKF 120
121 TTKCQCALIT LPLSNPLEST DGSKEDVDAL P
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.745 | e.20.1 | Heat shock protein 70kD (HSP70), C-terminal substrate-binding fragment |
| View | Download | 0.677 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.586 | a.8.2 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
| View | Download | 0.584 | a.24.4 | Hemerythrin |
| View | Download | 0.555 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
