| Protein: | PUP3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 205 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUP3.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-57 | [8..205] | [66..261] |
|
|
5.0E-57 | [8..205] | [67..262] |
|
|
1.0E-56 | [8..205] | [71..266] |
|
|
2.0E-56 | [5..205] | [51..249] |
|
|
2.0E-56 | [7..198] | [69..258] |
|
|
2.0E-56 | [8..205] | [71..266] |
|
Region A: Residues: [1-205] |
1 11 21 31 41 51
| | | | | |
1 MSDPSSINGG IVVAMTGKDC VAIACDLRLG SQSLGVSNKF EKIFHYGHVF LGITGLATDV 60
61 TTLNEMFRYK TNLYKLKEER AIEPETFTQL VSSSLYERRF GPYFVGPVVA GINSKSGKPF 120
121 IAGFDLIGCI DEAKDFIVSG TASDQLFGMC ESLYEPNLEP EDLFETISQA LLNAADRDAL 180
181 SGWGAVVYII KKDEVVKRYL KMRQD
|
| Detection Method: |  |
| Confidence: | 1230.0 |
| Match: | 1fntJ_ |
| Description: | CRYSTAL STRUCTURE OF THE 20S PROTEASOME FROM YEAST IN COMPLEX WITH THE PROTEASOME ACTIVATOR PA26 FROM TRYPANOSOME BRUCEI AT 3.2 ANGSTROMS RESOLUTION |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| endopeptidase activity | 6.91642761177919 | bayes_pls_golite062009 |
| peptidase activity | 6.84511694091156 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 6.5973571808298 | bayes_pls_golite062009 |
| hydrolase activity | 4.47652590304822 | bayes_pls_golite062009 |
| threonine-type endopeptidase activity | 2.98214579292788 | bayes_pls_golite062009 |
| threonine-type peptidase activity | 2.98214579292788 | bayes_pls_golite062009 |
| catalytic activity | 1.19663085909195 | bayes_pls_golite062009 |
| binding | 1.18139971903068 | bayes_pls_golite062009 |
| nucleic acid binding | 0.448212653390607 | bayes_pls_golite062009 |
