| Protein: | GIN4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1142 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GIN4.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1142] | [1..1142] |
|
|
0.0 | [8..881] | [10..803] |
|
|
0.0 | [3..654] | [4..660] |
|
|
0.0 | [4..654] | [41..713] |
|
|
0.0 | [1..654] | [35..691] |
|
|
0.0 | [1..654] | [235..907] |
|
Region A: Residues: [1-115] |
1 11 21 31 41 51
| | | | | |
1 MAINGNSIPA IKDNTIGPWK LGETLGLGST GKVQLARNGS TGQEAAVKVI SKAVFNTGNV 60
61 SGTSIVGSTT PDALPYGIER EIIIMKLLNH PNVLRLYDVW ETNTDLYLVL EYAEK
|
|
Region B: Residues: [314-371] |
1 11 21 31 41 51
| | | | | |
1 LSESNSSIDA TILQNLVILW HGRDPEGIKE KLREPGANAE KTLYALLYRF KCDTQKEL
|
| Detection Method: |  |
| Confidence: | 587.9897 |
| Match: | 1a06__ |
| Description: | Calmodulin-dependent protein kinase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [116-313] |
1 11 21 31 41 51
| | | | | |
1 GELFNLLVER GPLPEHEAIR FFRQIIIGVS YCHALGIVHR DLKPENLLLD HKYNIKIADF 60
61 GMAALETEGK LLETSCGSPH YAAPEIVSGI PYQGFASDVW SCGVILFALL TGRLPFDEED 120
121 GNIRTLLLKV QKGEFEMPSD DEISREAQDL IRKILTVDPE RRIKTRDILK HPLLQKYPSI 180
181 RDSKSIRGLP REDTYLTP
|
| Detection Method: | |
| Confidence: | 587.9897 |
| Match: | 1a06__ |
| Description: | Calmodulin-dependent protein kinase |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [372-1142] |
1 11 21 31 41 51
| | | | | |
1 IKQQQVKKRQ SISSVSVSPS KKVSTTPQRR RNRESLISVT SSRKKPISFN KFTASSASSS 60
61 NLTTPGSSKR LSKNFSSKKK LSTIVNQSSP TPASRNKRAS VINVEKNQKR ASIFSTTKKN 120
121 KRSSRSIKRM SLIPSMKRES VTTKLMSTYA KLAEDDDWEY IEKETKRTSS NFATLIDEIF 180
181 EYEKYEQIRK EKEELERKVR EAKAREELER RRRKQEEKER ARKLLEKEDL KRKQEELKKQ 240
241 IEIDISDLEQ ELSKHKEEKL DGNIRSISAP MENEEKNINH LEVDIDNILR RRNFSLQTRP 300
301 VSRLDPGIMF SSPTEEVSPV EPKRTENERL TTEKKILETI RRSKFLGSSF NIDKELKLSK 360
361 MEYPSIIAPQ RLSEERVVSD SNDGYESLIL PKDGNGVSQL KDSTATTAPV SDGRLRKISE 420
421 IRVPQFTRKS RHFSESNKRL SVLSMYSTKE SFTNLVDILK NGNLDVNNQQ SQRIPTPRSA 480
481 DDSEFLFETV NEEAEYTGNS SNDERLYDVG DSTIKDKSAL KLNFADRFNG SNEAKQTDNL 540
541 HLPILPPLNG DNELRKQNSQ EGDQAHPKIK SMIPESGSSS HTEKEEENEE KEEKKPEQHK 600
601 QEEDQEKREK VVDDMEPPLN KSVQKIREKN AGSQAKDHSK DHLKEHKQDK NTAIGNGSFF 660
661 RKFSKSSDKT MELYAKISAK QLFNGLEKLL RGWTQYGLKN IKSHPNNLTL TGKLSSDNIF 720
721 SLRSTLFEVN IYPRGKMSVV QFKKVSGSFK AVKKLVNEVE NVLNKEGVLQ K
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [613-690] |
1 11 21 31 41 51
| | | | | |
1 EIDISDLEQE LSKHKEEKLD GNIRSISAPM ENEEKNINHL EVDIDNILRR RNFSLQTRPV 60
61 SRLDPGIMFS SPTEEVSP
|
| Detection Method: | |
| Confidence: | 14.522879 |
| Match: | 1ul7A |
| Description: | Solution structure of kinase associated domain 1 of mouse MAP/microtubule affinity-regulating kinase 3 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein kinase activity | 4.05475891009228 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 3.7974128326421 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 3.59230737331367 | bayes_pls_golite062009 |
| kinase activity | 3.41737435609334 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 3.2342722637405 | bayes_pls_golite062009 |
| binding | 2.41732321506551 | bayes_pls_golite062009 |
| transferase activity | 2.04713540681686 | bayes_pls_golite062009 |
| ATP binding | 1.44435058039859 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 1.41005152726625 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 1.38971642420542 | bayes_pls_golite062009 |
| ribonucleotide binding | 1.16863558166547 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 1.16859376715941 | bayes_pls_golite062009 |
| purine nucleotide binding | 1.15633908642115 | bayes_pls_golite062009 |
| nucleotide binding | 1.14964488472581 | bayes_pls_golite062009 |
| catalytic activity | 0.836142537655721 | bayes_pls_golite062009 |
| protein binding | 0.704339182896017 | bayes_pls_golite062009 |
| AMP-activated protein kinase activity | 0.496765880715405 | bayes_pls_golite062009 |
| magnesium ion binding | 0.439688030503848 | bayes_pls_golite062009 |
|
Region A: Residues: [691-749] |
1 11 21 31 41 51
| | | | | |
1 VEPKRTENER LTTEKKILET IRRSKFLGSS FNIDKELKLS KMEYPSIIAP QRLSEERVV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [750-960] |
1 11 21 31 41 51
| | | | | |
1 SDSNDGYESL ILPKDGNGVS QLKDSTATTA PVSDGRLRKI SEIRVPQFTR KSRHFSESNK 60
61 RLSVLSMYST KESFTNLVDI LKNGNLDVNN QQSQRIPTPR SADDSEFLFE TVNEEAEYTG 120
121 NSSNDERLYD VGDSTIKDKS ALKLNFADRF NGSNEAKQTD NLHLPILPPL NGDNELRKQN 180
181 SQEGDQAHPK IKSMIPESGS SSHTEKEEEN E
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [961-1142] |
1 11 21 31 41 51
| | | | | |
1 EKEEKKPEQH KQEEDQEKRE KVVDDMEPPL NKSVQKIREK NAGSQAKDHS KDHLKEHKQD 60
61 KNTAIGNGSF FRKFSKSSDK TMELYAKISA KQLFNGLEKL LRGWTQYGLK NIKSHPNNLT 120
121 LTGKLSSDNI FSLRSTLFEV NIYPRGKMSV VQFKKVSGSF KAVKKLVNEV ENVLNKEGVL 180
181 QK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
