| Protein: | TFC6 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 672 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TFC6.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..672] | [1..672] |
|
|
0.0 | [274..672] | [191..577] |
|
Region A: Residues: [1-306] |
1 11 21 31 41 51
| | | | | |
1 MAVIPAKKRG RPRKSVVAEV PYDSLASPVS ENSGSKRPRR NASKKAVANF AQLVHAGRDD 60
61 VINTTQVNNV DDTDDDDFVL NDEGDGEESD NVEIEFENEL ESTKNEVADL NSSGSGASVR 120
121 PSGRRNTVQK LRLKKNSTKN MKSSSPGSSL GQKGRPIRLL KDLSSARDKI ERIYGLNKEK 180
181 LLLLAKVKEG FETSVFDFPF KNIQPDSPYF VCLDPPCKKE SAYNKVIGDK NRTVYHEINK 240
241 TEFENMIKLR TKRLKLLIGE VDAEVSTGDK IEFPVLANGK RRGFIYNVGG LVTDIAWLNI 300
301 EENTDI
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [307-672] |
1 11 21 31 41 51
| | | | | |
1 GKDIQYLAVA VSQYMDEPLN EHLEMFDKEK HSSCIQIFKM NTSTLHCVKV QTIVHSFGEV 60
61 WDLKWHEGCH APHLVGCLSF VSQEGTINFL EIIDNATDVH VFKMCEKPSL TLSLADSLIT 120
121 TFDFLSPTTV VCGFKNGFVA EFDLTDPEVP SFYDQVHDSY ILSVSTAYSD FEDTVVSTVA 180
181 VDGYFYIFNP KDIATTKTTV SRFRGSNLVP VVYCPQIYSY IYSDGASSLR AVPSRAAFAV 240
241 HPLVSRETTI TAIGVSRLHP MVLAGSADGS LIITNAARRL LHGIKNSSAT QKSLRLWKWD 300
301 YSIKDDKYRI DSSYEVYPLT VNDVSKAKID AHGINITCTK WNETSAGGKC YAFSNSAGLL 360
361 TLEYLS
|
| Detection Method: | |
| Confidence: | 14.02 |
| Match: | 1erjA |
| Description: | Tup1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
