| Protein: | SEC5 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 971 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SEC5.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..971] | [1..971] |
|
|
0.0 | [39..969] | [77..918] |
|
|
0.0 | [39..969] | [77..918] |
|
|
0.0 | [39..969] | [77..918] |
|
|
6.0E-95 | [44..365] | [170..487] |
|
Region A: Residues: [1-86] |
1 11 21 31 41 51
| | | | | |
1 MDRFQIGDEQ LLRFYQLKTI NPTHSWAQDS SKLNNEEATS NELGVETSFD ILKDFKYGNQ 60
61 ISIDKESRAY LNDESLSYIR DPLNGQ
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.336 | 0.905 | bipolar cellular bud site selection | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
|
Region A: Residues: [87-162] |
1 11 21 31 41 51
| | | | | |
1 EMSKELQHLP NDSMRLNYLV NSKQFNVKAF LRDMHKQDSF NDLNNSLDRL DSDIQDQSIH 60
61 LKQLVGKNFT KYVKIK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [163-392] |
1 11 21 31 41 51
| | | | | |
1 NKLDQIYKEF DEKTNEKNQC DSPKENQINV ESLNKKVDEV IRTTTFKLKP LMDNYQKILN 60
61 YQATKKFIEL NKFYFNLPKS LKRCLTNNDF NEFIIEYSKG LTLRRRFNQS SDASQSLVIK 120
121 RIWTQIENLL VTYKDLIWNS LINSNFNIDQ PQETILSLFS KLLNLENFIN NNQRESESGN 180
181 KNTTSSSNEN PILRWMSIKM NGFQNELNEL SGHMISKIIH SQRLILQNNT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [393-532] |
1 11 21 31 41 51
| | | | | |
1 NQDKSQGCVE LSYYLKINQL FQIISDTGKD SEGLKSTVEP NKVNTISGTS YLNLNCQPSS 60
61 QGLTDSPTII EMWLLILKYI NDLWKICDQF IEFWEHIEKF LDGTYQNSII NEKRKENILI 120
121 GDSNIIESYQ KSLILKEEQI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [533-671] |
1 11 21 31 41 51
| | | | | |
1 NEVRLKGEEF ITSVSQNLIS FFTSSQSSLP SSLKDSTGDI TRSNKDSGSP LDYGFIPPNC 60
61 NGLSCLRYLP KIVEPILKFS TELAQLNITT NGITICRNTL STIINRCVGA ISSTKLRDIS 120
121 NFYQLENWQV YETVTFSSK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [672-725] |
1 11 21 31 41 51
| | | | | |
1 SQDSSKNLTF EYGVTQFPEI VTSFQEVSIK TTRDLLFAYE KLPIINGISV VSYP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [726-971] |
1 11 21 31 41 51
| | | | | |
1 SKQLLTGIEI QQIISMEAVL EAILKNAAKD KDNPRNSHTI LTLTNLQYFR ECAFPNILQY 60
61 FDDAFEWNLA SKNLELFSLL SKMESSIFGN YLSDLKINLR DTLEEKFHEI NWPMYTSNSF 120
121 RVGDYIIEAL MILIVVHSEC FRIGPQLIHK ILIETQIFIA RYLFEAFKPY VGNLSNDGSL 180
181 QIIVDLEFFQ KVMGPLLEKD TEATLRACLQ NCFQNDTNRL QKCINEINPI VSANLKRTAI 240
241 QFAAFS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
