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Protein Overview: SEC5A_ARATH

General Information:
Name(s) found: SEC5A_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Exocyst complex component SEC5A OS=Arabidopsis thaliana GN=SEC5A PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1090 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDA]
    plasma membrane [IDA]
    Biological Process: pollen tube growth [IGI]
    pollen germination [IGI]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSDSNDLDE DELLQMALKE QAKRDLTYQK PPSSSARKPV ANLVQQPRQQ KPVAAAAAPP  60
   61 KKSAAAVRKP SMDEDEESEV ELLSISSGDD DLEREREIGG SSGGAGRGRG SDVREKGRAR 120
  121 KEDDGAWDGG EPDCWKRVNE AELARRVRDM RESRTAPVVQ KVEGKAPAPG KKVALTSLQS 180
  181 LPRGMECIDP LKLGIIDNKT LRLITESSGS PSKAEKVDNT LREKLVYFSD HFDPKLFLSR 240
  241 IHQDTTAADL EAGALGLKSD LKGRNLQRKQ LVKDNFDCFV SCKTTIDDIE SKLKRIEEDP 300
  301 EGSGTTHLFN CMKSVTSRAN LAFEPLFERQ AQAEKIRSVQ GMLQRFRTLF NLPSIIRSSI 360
  361 SKGEYDLAVR EYKKAKSIAL PSHVNILKRV LEEVEKVMLE FKGTLYKSME DPKIDFTSLE 420
  421 NTVRLLLELE PESDPVWHYL NVQNHRIHGL LEKCTYDHEA RVEILRNDTH EKAISDAKWQ 480
  481 QIQQNGVSYS DTASSNENNA VQVDLQSVEF PSEEIDILKG RYIKRLTAVL VHHIPVFWKT 540
  541 AISIFSGKFA KSSQVTDTSA NKAEEKVTEA RYSTHSLEEV AGMIRKTISV YEAKVNSTFC 600
  601 DFDESCILRP FMSDAINEVS KACQAFEAKE STPHSAVVAL RKIQAEITKI YIQRLCSWMR 660
  661 ASTEGISKEE TWIPVSILER NRSPYAISYL PLAFRSVIVS GMEQVNLMIL SVKSEAAKSE 720
  721 DMFAQIEEII ISVRLAFLNC FLDFAAHLEQ IGADLSQSTS RQDNWKNGYS DEHQEEPSAN 780
  781 TYGSVIDPHR RLLMVLSNIG YCKDELASEL YNKFKYTWLQ SRDKNEDSSD LQDLIMSFSG 840
  841 LGEKVLEHYT FAKANLIRTA ATNYLLDSGI QWGSAPQVKG IRDAAVELLH TLVAVHAEVF 900
  901 AGAKPLLDKI LGVLIEGLID TFLSVVEENR SSDLRSIDAN GFCQLMFELE YFETVLYSYF 960
  961 TSAATESLKS LQGTVLEIAI ESISEAVETP GHNRRPTRGS EDTVSDDKQS VSADDLLALT1020
 1021 KQCSNELLQQ ELERTRVNTA CFAESAPLES TPPLPKATYS SFRGSMDSPS RNYRGSQSSG1080
 1081 SPINARPRRR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..220] PSI-BLAST 10.39794 No description for 1y0fB was found.
    2 View Details [221..412] deduced N/A No confident structure predictions are available.
    3 View Details [413..495] deduced N/A No confident structure predictions are available.
    4 View Details [496..681] deduced N/A No confident structure predictions are available.
    5 View Details [682..934] deduced N/A No confident structure predictions are available.
    6 View Details [935..1090] MSA 1.113985 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle