| Protein: | SEC5A_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1090 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SEC5A_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
612.0 | [0..1] | [1090..1] |
|
|
488.0 | [0..1] | [1084..1] |
|
|
474.0 | [0..1] | [1090..1] |
|
|
433.0 | [0..184] | [1012..117] |
|
|
427.0 | [0..184] | [1012..117] |
|
|
426.0 | [0..184] | [1012..117] |
|
|
425.0 | [0..184] | [1012..117] |
|
Region A: Residues: [1-220] |
1 11 21 31 41 51
| | | | | |
1 MSSDSNDLDE DELLQMALKE QAKRDLTYQK PPSSSARKPV ANLVQQPRQQ KPVAAAAAPP 60
61 KKSAAAVRKP SMDEDEESEV ELLSISSGDD DLEREREIGG SSGGAGRGRG SDVREKGRAR 120
121 KEDDGAWDGG EPDCWKRVNE AELARRVRDM RESRTAPVVQ KVEGKAPAPG KKVALTSLQS 180
181 LPRGMECIDP LKLGIIDNKT LRLITESSGS PSKAEKVDNT
|
| Detection Method: |  |
| Confidence: | 10.39794 |
| Match: | 1y0fB |
| Description: | No description for 1y0fB was found. |
|
Region A: Residues: [221-412] |
1 11 21 31 41 51
| | | | | |
1 LREKLVYFSD HFDPKLFLSR IHQDTTAADL EAGALGLKSD LKGRNLQRKQ LVKDNFDCFV 60
61 SCKTTIDDIE SKLKRIEEDP EGSGTTHLFN CMKSVTSRAN LAFEPLFERQ AQAEKIRSVQ 120
121 GMLQRFRTLF NLPSIIRSSI SKGEYDLAVR EYKKAKSIAL PSHVNILKRV LEEVEKVMLE 180
181 FKGTLYKSME DP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [413-495] |
1 11 21 31 41 51
| | | | | |
1 KIDFTSLENT VRLLLELEPE SDPVWHYLNV QNHRIHGLLE KCTYDHEARV EILRNDTHEK 60
61 AISDAKWQQI QQNGVSYSDT ASS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [496-681] |
1 11 21 31 41 51
| | | | | |
1 NENNAVQVDL QSVEFPSEEI DILKGRYIKR LTAVLVHHIP VFWKTAISIF SGKFAKSSQV 60
61 TDTSANKAEE KVTEARYSTH SLEEVAGMIR KTISVYEAKV NSTFCDFDES CILRPFMSDA 120
121 INEVSKACQA FEAKESTPHS AVVALRKIQA EITKIYIQRL CSWMRASTEG ISKEETWIPV 180
181 SILERN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [682-934] |
1 11 21 31 41 51
| | | | | |
1 RSPYAISYLP LAFRSVIVSG MEQVNLMILS VKSEAAKSED MFAQIEEIII SVRLAFLNCF 60
61 LDFAAHLEQI GADLSQSTSR QDNWKNGYSD EHQEEPSANT YGSVIDPHRR LLMVLSNIGY 120
121 CKDELASELY NKFKYTWLQS RDKNEDSSDL QDLIMSFSGL GEKVLEHYTF AKANLIRTAA 180
181 TNYLLDSGIQ WGSAPQVKGI RDAAVELLHT LVAVHAEVFA GAKPLLDKIL GVLIEGLIDT 240
241 FLSVVEENRS SDL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [935-1090] |
1 11 21 31 41 51
| | | | | |
1 RSIDANGFCQ LMFELEYFET VLYSYFTSAA TESLKSLQGT VLEIAIESIS EAVETPGHNR 60
61 RPTRGSEDTV SDDKQSVSAD DLLALTKQCS NELLQQELER TRVNTACFAE SAPLESTPPL 120
121 PKATYSSFRG SMDSPSRNYR GSQSSGSPIN ARPRRR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
