| Protein: | PHO2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 559 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PHO2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..559] | [1..559] |
|
|
2.0E-47 | [36..247] | [181..402] |
|
|
5.0E-47 | [6..333] | [483..846] |
|
|
6.0E-47 | [36..247] | [162..383] |
|
|
4.0E-46 | [55..298] | [195..435] |
|
|
5.0E-46 | [36..247] | [195..417] |
|
|
5.0E-46 | [55..298] | [195..435] |
|
Region A: Residues: [1-138] |
1 11 21 31 41 51
| | | | | |
1 MMEEFSYDHD FNTHFATDLD YLQHDQQQQQ QQQHDQQHNQ QQQPQPQPIQ TQNLEHDHDQ 60
61 HTNDMSASSN ASDSGPQRPK RTRAKGEALD VLKRKFEINP TPSLVERKKI SDLIGMPEKN 120
121 VRIWFQNRRA KLRKKQHG
|
| Detection Method: |  |
| Confidence: | 83.529817 |
| Match: | 1fjlA_ |
| Description: | Paired protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 5.13863038737912 | bayes_pls_golite062009 |
| DNA binding | 4.41876985649951 | bayes_pls_golite062009 |
| nucleic acid binding | 4.09724849396574 | bayes_pls_golite062009 |
| transcription factor activity | 3.86239731611043 | bayes_pls_golite062009 |
| binding | 3.55096238224843 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.32406445003946 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.26183812259792 | bayes_pls_golite062009 |
| transcription repressor activity | 1.91962622287073 | bayes_pls_golite062009 |
| transcription activator activity | 1.77700860354597 | bayes_pls_golite062009 |
| transcription factor binding | 1.40653841901929 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.04108499638264 | bayes_pls_golite062009 |
| protein binding | 0.891078200474841 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.84983974758882 | bayes_pls_golite062009 |
| chromatin binding | 0.821515245941799 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.12996981272574 | bayes_pls_golite062009 |
|
Region A: Residues: [139-295] |
1 11 21 31 41 51
| | | | | |
1 SNKDTIPSSQ SRDIANDYDR GSTDNNLVTT TSTSSIFHDE DLTFFDRIPL NSNNNYYFFD 60
61 ICSITVGSWN RMKSGALQRR NFQSIKELRN LSPIKINNIM SNATDLMVLI SKKNSEINYF 120
121 FSAMANNTKI LFRIFFPLSS VTNCSLTLET DDDIINS
|
|
Region B: Residues: [329-340] |
1 11 21 31 41 51
| | | | | |
1 NAKDNFGELK LT
|
| Detection Method: | |
| Confidence: | 7.23 |
| Match: | 1ruxA |
| Description: | Adenovirus hexon |
|
Region A: Residues: [296-328] |
1 11 21 31 41 51
| | | | | |
1 NNTSDKNNSN TNNDDDNDDN SNEDNDNSSE DKR
|
|
Region B: Residues: [341-559] |
1 11 21 31 41 51
| | | | | |
1 VTRSPTFAVY FLNNAPDEDP NLNNQWSICD DFSEGRQVND AFVGGSNIPH TLKGLQKSLR 60
61 FMNSLILDYK SSNEILPTIN TAIPTAAVPQ QNIAPPFLNT NSSATDSNPN TNLEDSLFFD 120
121 HDLLSSSITN TNNGQGSNNG RQASKDDTLN LLDTTVNSNN NHNANNEENH LAQEHLSNDA 180
181 DIVANPNDHL LSLPTDSELP NTPDFLKNTN ELTDEHRWI
|
| Detection Method: | |
| Confidence: | 7.23 |
| Match: | 1ruxA |
| Description: | Adenovirus hexon |
|
Region A: Residues: [458-559] |
1 11 21 31 41 51
| | | | | |
1 FFDHDLLSSS ITNTNNGQGS NNGRQASKDD TLNLLDTTVN SNNNHNANNE ENHLAQEHLS 60
61 NDADIVANPN DHLLSLPTDS ELPNTPDFLK NTNELTDEHR WI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
