| Protein: | MSI1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 422 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MSI1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [4..417] | [846..1251] |
|
|
0.0 | [2..422] | [951..1368] |
|
Region A: Residues: [1-111] |
1 11 21 31 41 51
| | | | | |
1 MNQCAKDITH EASSIPIDLQ ERYSHWKKNT KLLYDYLNTN STKWPSLTCQ FFPDLDTTSD 60
61 EHRILLSSFT SSQKPEDETI YISKISTLGH IKWSSLNNFD MDEMEFKPEN S
|
| Detection Method: |  |
| Confidence: | 22.0 |
| Match: | 1gxrA_ |
| Description: | Groucho/tle1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| histone methyltransferase activity (H3-K4 specific) | 4.71992275913384 | bayes_pls_golite062009 |
| acetyltransferase activity | 3.85374902981345 | bayes_pls_golite062009 |
| acyltransferase activity | 3.35098520158193 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups other than amino-acyl groups | 3.31615347567536 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups | 3.14917998298348 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 2.79445416141967 | bayes_pls_golite062009 |
| binding | 2.42570478946173 | bayes_pls_golite062009 |
| transcription regulator activity | 2.3610959773142 | bayes_pls_golite062009 |
| nucleic acid binding | 2.30918780727915 | bayes_pls_golite062009 |
| transcription repressor activity | 2.29049708962212 | bayes_pls_golite062009 |
| S-adenosylmethionine-dependent methyltransferase activity | 2.18628561734369 | bayes_pls_golite062009 |
| histone methyltransferase activity | 1.85632145559025 | bayes_pls_golite062009 |
| DNA binding | 1.71685536470455 | bayes_pls_golite062009 |
| dynein binding | 1.62099593211487 | bayes_pls_golite062009 |
| transcription corepressor activity | 1.41752877005447 | bayes_pls_golite062009 |
| protein methyltransferase activity | 1.35170368882651 | bayes_pls_golite062009 |
| protein binding | 1.21879977456466 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.19593750149343 | bayes_pls_golite062009 |
| lysine N-methyltransferase activity | 1.15313682561559 | bayes_pls_golite062009 |
| protein-lysine N-methyltransferase activity | 1.15313682561559 | bayes_pls_golite062009 |
| histone-lysine N-methyltransferase activity | 1.15313682561559 | bayes_pls_golite062009 |
| transcription factor activity | 1.08768505897883 | bayes_pls_golite062009 |
| transcription initiation factor activity | 1.01962930136588 | bayes_pls_golite062009 |
| 0.88172763425403 | bayes_pls_golite062009 | |
| histone binding | 0.685319917508843 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.676924760416604 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 0.625780732991652 | bayes_pls_golite062009 |
| actin binding | 0.529861581509437 | bayes_pls_golite062009 |
| transcription factor binding | 0.489473003915035 | bayes_pls_golite062009 |
| DNA polymerase activity | 0.428715007921149 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.426429095658617 | bayes_pls_golite062009 |
| kinase activity | 0.387572734234845 | bayes_pls_golite062009 |
| snoRNA binding | 0.347797037104681 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.30761651528651 | bayes_pls_golite062009 |
| transporter activity | 0.284701931503833 | bayes_pls_golite062009 |
| structural molecule activity | 0.254012051644049 | bayes_pls_golite062009 |
| protein kinase activity | 0.229242350006544 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.226335610368636 | bayes_pls_golite062009 |
| DNA helicase activity | 0.220747580531792 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.161639372576406 | bayes_pls_golite062009 |
| chromatin binding | 0.151977098745772 | bayes_pls_golite062009 |
| N-methyltransferase activity | 0.00335766408304172 | bayes_pls_golite062009 |
|
Region A: Residues: [112-422] |
1 11 21 31 41 51
| | | | | |
1 TRFPSKHLVN DISIFFPNGE CNRARYLPQN PDIIAGASSD GAIYIFDRTK HGSTRIRQSK 60
61 ISHPFETKLF GSHGVIQDVE AMDTSSADIN EATSLAWNLQ QEALLLSSHS NGQVQVWDIK 120
121 QYSHENPIID LPLVSINSDG TAVNDVTWMP THDSLFAACT EGNAVSLLDL RTKKEKLQSN 180
181 REKHDGGVNS CRFNYKNSLI LASADSNGRL NLWDIRNMNK SPIATMEHGT SVSTLEWSPN 240
241 FDTVLATAGQ EDGLVKLWDT SCEETIFTHG GHMLGVNDIS WDAHDPWLMC SVANDNSVHI 300
301 WKPAGNLVGH S
|
| Detection Method: | |
| Confidence: | 132.10721 |
| Match: | 1gg2B_ |
| Description: | beta1-subunit of the signal-transducing G protein heterotrimer |
Matching Structure (courtesy of the PDB): |
|
