Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YBR090C-A, NHP6B.
| Description | E-value | Query Range |
Subject Range |
|
|
5.0E-33 | [20..98] | [241..319] |
|
|
5.0E-33 | [10..98] | [23..111] |
|
|
5.0E-33 | [5..98] | [24..117] |
|
|
2.0E-32 | [6..98] | [14..106] |
|
Region A: Residues: [1-99] |
1 11 21 31 41 51
| | | | | |
1 MAATKEAKQP KEPKKRTTRR KKDPNAPKRR LSAYMFFANE NRDIVRSENP DVTFGQVGRI 60
61 LGERWKALTA EEKQPYESKA QADKKRYESE KELYNATRA
|
| Detection Method: |  |
| Confidence: | 284.0103 |
| Match: | 1cg7A_ |
| Description: | NHP6a |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA binding | 5.15324651287773 | bayes_pls_golite062009 |
| nucleic acid binding | 5.01228762819617 | bayes_pls_golite062009 |
| transcription regulator activity | 4.9607192917135 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 4.06355503548774 | bayes_pls_golite062009 |
| transcription factor activity | 3.82658263870186 | bayes_pls_golite062009 |
| binding | 3.6211482127468 | bayes_pls_golite062009 |
| transcription activator activity | 2.95665802871704 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.75319687398598 | bayes_pls_golite062009 |
| protein binding | 2.18211240370246 | bayes_pls_golite062009 |
| chromatin binding | 1.64428658020027 | bayes_pls_golite062009 |
| transcription repressor activity | 1.53825678633232 | bayes_pls_golite062009 |
| transcription factor binding | 1.10315330167937 | bayes_pls_golite062009 |
| DNA bending activity | 0.87985209274756 | bayes_pls_golite062009 |
| crossed form four-way junction DNA binding | 0.293183929205961 | bayes_pls_golite062009 |
| bent DNA binding | 0.293183929205961 | bayes_pls_golite062009 |
| open form four-way junction DNA binding | 0.293183929205961 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity, enhancer binding | 0.261169200304829 | bayes_pls_golite062009 |
