| Protein: | RKM3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 552 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RKM3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..552] | [1..552] |
|
|
4.0E-66 | [1..327] | [38..348] |
|
|
3.0E-64 | [12..387] | [36..333] |
|
|
3.0E-63 | [11..325] | [56..355] |
|
|
4.0E-63 | [12..302] | [35..302] |
|
|
3.0E-62 | [11..327] | [53..354] |
|
|
2.0E-61 | [12..327] | [56..356] |
|
Region A: Residues: [1-295] |
1 11 21 31 41 51
| | | | | |
1 MSVTFKDDVH RILKFVANCN GRFEDSKCDI RESPLGGLGV FAKTDIAEGE SILTLNKSSI 60
61 FSASNSSIAN LLCDSSIDGM LALNIAFIYE TTVFRNSSHW YPFLRTIRIR DDEGHLNLPP 120
121 SFWHADAKRL LKGTSFDTLF DSLAPEEEIM EGFEIAVDLA HKWNDEFGLE IPKGFLDVSE 180
181 ENHEEDYNLK LEKFISVAYT LSSRGFEIDA YHETALVPIA DLFNHHVSDP DLKFVSLYDV 240
241 CDKCGEPDMC KHLIAEEYLE AENLDKNMPK VASMETRVID EDLIKSLEND LEKEY
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| histone methyltransferase activity | 6.20878333364554 | bayes_pls_golite062009 |
| protein methyltransferase activity | 6.08778683840554 | bayes_pls_golite062009 |
| lysine N-methyltransferase activity | 5.45106430536252 | bayes_pls_golite062009 |
| protein-lysine N-methyltransferase activity | 5.45106430536252 | bayes_pls_golite062009 |
| histone-lysine N-methyltransferase activity | 5.45106430536252 | bayes_pls_golite062009 |
| N-methyltransferase activity | 3.98411678860954 | bayes_pls_golite062009 |
| histone methyltransferase activity (H3-K9 specific) | 3.54138873512018 | bayes_pls_golite062009 |
| S-adenosylmethionine-dependent methyltransferase activity | 2.69428385009711 | bayes_pls_golite062009 |
| methyltransferase activity | 2.33114816345072 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 2.25175257044903 | bayes_pls_golite062009 |
| binding | 1.67469558504376 | bayes_pls_golite062009 |
| nucleic acid binding | 1.29511015534184 | bayes_pls_golite062009 |
| protein binding | 1.07532079834012 | bayes_pls_golite062009 |
| transferase activity | 0.653108419761009 | bayes_pls_golite062009 |
| chromatin binding | 0.628375771647179 | bayes_pls_golite062009 |
| catalytic activity | 0.414641636618101 | bayes_pls_golite062009 |
|
Region A: Residues: [296-399] |
1 11 21 31 41 51
| | | | | |
1 SNVTANIEDD DGGIENPDEC VDLVLKNDVA QGQEIFNSYG ELSNVFLLAR YGFTVPENQY 60
61 DIVHLGPDFM KILKKEEKYQ EKVKWWSQVG HGLFSAWYAQ MRQE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [400-552] |
1 11 21 31 41 51
| | | | | |
1 DEEDEDGQAK SDNLSDDIES EEEEEEEEGD DSLESWLSQL YIDSSGEPSP STWALANLLT 60
61 LTAVQWESLF SKKATPHISD SIVNEEKLPF LAKKDNPHSK KLLSNLLKEK QLPCIKGDNS 120
121 SKITSATKSM LQNARTLVQS EHNILDRCLK RLS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
