| Protein: | gi|125572934, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 239 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125572934, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
241.0 | [0..1] | [239..1] |
|
Region A: Residues: [1-239] |
1 11 21 31 41 51
| | | | | |
1 MESRKPPPSA LVDNHVVPGD VVLDLTEMTN QTIKLGAGLR QDCDTIQATS AGRLRLSKPN 60
61 KYWVESSQKR YIPSVEDTVL GVVVDTKPDN FLVDIKGPNL AFLPVLAFEG GTRRNIPKFE 120
121 IGTLIYARVV KANSIMNPEL SCMDATGKAA EFGQLKDGYM FDTSTGLSRM LLSSPTCPVL 180
181 EALGKKLSFE IAVGLNGRVW VNAPSPSNVI VVSNAIIKSE SLSGIGQRSM VESLLERLS
|
| Detection Method: |  |
| Confidence: | 50.221849 |
| Match: | 2nn6G |
| Description: | No description for 2nn6G was found. |
| Term | Confidence | Notes |
| RNA binding | 5.18414740305744 | bayes_pls_golite062009 |
| exoribonuclease activity | 4.57899887224013 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 4.54136587416505 | bayes_pls_golite062009 |
| ribonuclease activity | 4.53127626527286 | bayes_pls_golite062009 |
| structural constituent of ribosome | 3.89236528662255 | bayes_pls_golite062009 |
| mRNA binding | 3.82977088614136 | bayes_pls_golite062009 |
| nucleic acid binding | 3.68444148122352 | bayes_pls_golite062009 |
| structural molecule activity | 3.54418030121155 | bayes_pls_golite062009 |
| 3'-5'-exoribonuclease activity | 3.40736445988244 | bayes_pls_golite062009 |
| binding | 2.8667878224392 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 1.62417180482862 | bayes_pls_golite062009 |
| 3'-5' exonuclease activity | 1.55351486913613 | bayes_pls_golite062009 |
| transcription regulator activity | 1.43703138180882 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 1.42151567812515 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 1.35850109411274 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 1.35845277283398 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 1.35845277283398 | bayes_pls_golite062009 |
| 1.27314120901993 | bayes_pls_golite062009 | |
| exonuclease activity | 1.25488463068335 | bayes_pls_golite062009 |
| DNA binding | 1.20852534725468 | bayes_pls_golite062009 |
| protein binding | 1.18834207917479 | bayes_pls_golite062009 |
| exoribonuclease II activity | 1.18248519339188 | bayes_pls_golite062009 |
| hydrolase activity | 0.704891843968224 | bayes_pls_golite062009 |
| mRNA 3'-UTR binding | 0.489176583045793 | bayes_pls_golite062009 |
| transcription factor activity | 0.386248501195543 | bayes_pls_golite062009 |
| ligase activity | 0.346041081217685 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.32222928997178 | bayes_pls_golite062009 |
| catalytic activity | 0.161830442565647 | bayes_pls_golite062009 |
| aspartate-tRNA ligase activity | 0.151650064901878 | bayes_pls_golite062009 |
| translation initiation factor activity | 0.11625379846973 | bayes_pls_golite062009 |
| single-stranded DNA binding | 0.1069917291606 | bayes_pls_golite062009 |
