| Protein: | SYKC_SCHPO |
| Organism: | Schizosaccharomyces pombe 972h- |
| Length: | 591 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SYKC_SCHPO.
| Description | E-value | Query Range |
Subject Range |
|
|
576.0 | [0..9] | [580..52] |
|
|
571.0 | [0..1] | [591..1] |
|
|
567.0 | [0..1] | [591..346] |
|
|
567.0 | [0..9] | [580..16] |
|
|
567.0 | [0..9] | [580..2] |
|
|
566.0 | [0..9] | [580..6] |
|
Region A: Residues: [1-591] |
1 11 21 31 41 51
| | | | | |
1 MSEEQVNGVT QAVKALVLDP VTGEQVSKTE LKKREKQRAR ELAKAKKQAE KAASAPVAAP 60
61 KSSSKKEEDL DPSQYFENRS RTIMELRQTK DPNPYPHKFQ VTITLPEFIA KYEGLARGET 120
121 KPEVEVAVAG RVLGLRTAGN KLRFYEIHAD GKKLQVMCQA QDADTVDFAA QHEHLRRGDI 180
181 IGIRGYPGRS NPKGRADGEL SIFARQCVLL SPCLRMLPKE HYGLKDLEIR HRQRYLDLIM 240
241 NRSTRDRFVM RSRIIQYIRH FFDSRDFMEV ETPMMNMIAG GATAKPFVTH HNDLDMDLYM 300
301 RIAPELYLKM LVVGGLDRVY EIGRQFRNEG ADLTHNPEFT SIEFYQAYAD YYDLMDTTEE 360
361 LLSGLVKDLT GSYKVPYHPE GPEGPKWELD FSRPWRRINM IEYLEEKLNT KFPPGDQLHT 420
421 PEANAFLRDL CAKHGVECAP PQTCSRLLDK LVGEFIESEC INPTFIIGHP QMMSPLAKYH 480
481 RSDAGLCERF EAFVATKEIC NAYTELNDIF DQRARFEEQA RQKAQGDDEA QIIDENFCTA 540
541 LEYGLPPTGG WGMGVDRLVM FLTDSNTIRE VLLFPHMKPE VQAAEPTVVK E
|
| Detection Method: |  |
| Confidence: | 153.0 |
| Match: | 1bbuA |
| Description: | Lysyl-tRNA synthetase (LysRS) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ligase activity, forming aminoacyl-tRNA and related compounds | 7.89468709683036 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 7.89468709683036 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 7.88410036819636 | bayes_pls_golite062009 |
| ligase activity | 6.92073480193262 | bayes_pls_golite062009 |
| lysine-tRNA ligase activity | 5.79033103181143 | bayes_pls_golite062009 |
| aspartate-tRNA ligase activity | 3.80084837437429 | bayes_pls_golite062009 |
| phenylalanine-tRNA ligase activity | 2.99105702052936 | bayes_pls_golite062009 |
| serine-tRNA ligase activity | 2.46505535069103 | bayes_pls_golite062009 |
| structural constituent of ribosome | 2.43759174701552 | bayes_pls_golite062009 |
| glycine-tRNA ligase activity | 2.29229136935761 | bayes_pls_golite062009 |
| threonine-tRNA ligase activity | 2.18642354927 | bayes_pls_golite062009 |
| structural molecule activity | 2.08258913217268 | bayes_pls_golite062009 |
| catalytic activity | 1.99372273395202 | bayes_pls_golite062009 |
| alanine-tRNA ligase activity | 1.82594054955281 | bayes_pls_golite062009 |
| histidine-tRNA ligase activity | 1.72215103383322 | bayes_pls_golite062009 |
| translation initiation factor activity | 0.96756670903925 | bayes_pls_golite062009 |
| asparagine-tRNA ligase activity | 0.921492123574877 | bayes_pls_golite062009 |
| binding | 0.916222310895772 | bayes_pls_golite062009 |
| single-stranded DNA binding | 0.56590887755068 | bayes_pls_golite062009 |
| transcription regulator activity | 0.375542987753806 | bayes_pls_golite062009 |
| ribonuclease activity | 0.305684604963838 | bayes_pls_golite062009 |
| nucleic acid binding | 0.281662799812287 | bayes_pls_golite062009 |
| DNA binding | 0.0309732052586011 | bayes_pls_golite062009 |
