| Protein: | Pkcdelta-PC, Pkc... |
| Organism: | Drosophila melanogaster |
| Length: | 671 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Pkcdelta-PC, Pkc....
| Description | E-value | Query Range |
Subject Range |
|
|
534.0 | [0..52] | [671..538] |
|
Region A: Residues: [1-76] |
1 11 21 31 41 51
| | | | | |
1 MMFTRAQVRK QKTSNSSSQR PRSSGGSTRH ETRYKQSSTS SSGAGSGLSG ASGASGARRD 60
61 QYRDRDHYGK HSFELP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [77-195] |
1 11 21 31 41 51
| | | | | |
1 RQHSKEEAYH RDRESSAGGV DRGERSGIGG NGGGVTGGGV YVDRRTRPRS ITNRRGAIKH 60
61 QKTHDINGHR FVAKFFRQPT FCAFCNLFLW GFGKQGYQCI ICQTVVHKKC HDKLLGKCS
|
| Detection Method: | |
| Confidence: | 14.045757 |
| Match: | 1xa6A |
| Description: | Crystal Structure of the Human Beta2-Chimaerin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| general RNA polymerase II transcription factor activity | 3.71782887289779 | bayes_pls_golite062009 |
| transcription regulator activity | 2.86705824967236 | bayes_pls_golite062009 |
| binding | 2.79128751898373 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 2.10625597744594 | bayes_pls_golite062009 |
| DNA binding | 2.06132216820898 | bayes_pls_golite062009 |
| kinase activity | 2.03632850156074 | bayes_pls_golite062009 |
| nucleic acid binding | 1.91441035614579 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.8531437045627 | bayes_pls_golite062009 |
| protein kinase activity | 1.62921423829738 | bayes_pls_golite062009 |
| transferase activity | 1.4550521488922 | bayes_pls_golite062009 |
| transcription factor activity | 1.39657429296564 | bayes_pls_golite062009 |
| GTPase regulator activity | 1.39167263636091 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 1.37139209958305 | bayes_pls_golite062009 |
| protein binding | 1.29100556128076 | bayes_pls_golite062009 |
| signal transducer activity | 1.25507073225414 | bayes_pls_golite062009 |
| molecular transducer activity | 1.25507073225414 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.10685156896266 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 0.956859696337723 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.911061212692491 | bayes_pls_golite062009 |
| guanyl-nucleotide exchange factor activity | 0.907368864863833 | bayes_pls_golite062009 |
| small GTPase regulator activity | 0.661240850692236 | bayes_pls_golite062009 |
| kinase binding | 0.494958567742569 | bayes_pls_golite062009 |
| catalytic activity | 0.194464246602439 | bayes_pls_golite062009 |
| lipid binding | 0.170968368793169 | bayes_pls_golite062009 |
|
Region A: Residues: [196-273] |
1 11 21 31 41 51
| | | | | |
1 GSVFTSASTI LLRERFKIDM PHRFKPHTFM SPTFCDHCGS LMGGFFIQGL KCEECDVNCH 60
61 KKCERLTANL CGVNQKLI
|
| Detection Method: | |
| Confidence: | 2.91 |
| Match: | 2db6A |
| Description: | No description for 2db6A was found. |
|
Region A: Residues: [274-338] |
1 11 21 31 41 51
| | | | | |
1 VEALNHVKRG AREARDSPST PPSLNPAYKI EASEEHDETS YTYSQFQKSG RFTAPATVIP 60
61 RFKNY
|
| Detection Method: | |
| Confidence: | 49.522879 |
| Match: | 1fmkA |
| Description: | CRYSTAL STRUCTURE OF HUMAN TYROSINE-PROTEIN KINASE C-SRC |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| cytoskeletal protein binding | 4.41722924924158 | bayes_pls_golite062009 |
| actin binding | 3.91045208670052 | bayes_pls_golite062009 |
| binding | 3.06905798270146 | bayes_pls_golite062009 |
| actin filament binding | 2.72908433443928 | bayes_pls_golite062009 |
| protein binding | 2.08632303609243 | bayes_pls_golite062009 |
| molecular transducer activity | 1.34867629228264 | bayes_pls_golite062009 |
| signal transducer activity | 1.34867629228264 | bayes_pls_golite062009 |
| transporter activity | 1.30447542854757 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.08558010881058 | bayes_pls_golite062009 |
| insulin receptor binding | 1.02499153496761 | bayes_pls_golite062009 |
| structural molecule activity | 0.989403012920596 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.820987609295422 | bayes_pls_golite062009 |
| vinculin binding | 0.666656406096231 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.570864043201529 | bayes_pls_golite062009 |
| structural constituent of muscle | 0.52430033936893 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.371928447183203 | bayes_pls_golite062009 |
| receptor binding | 0.351326788023913 | bayes_pls_golite062009 |
| insulin receptor substrate binding | 0.30555304014394 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.277388904131159 | bayes_pls_golite062009 |
|
Region A: Residues: [339-671] |
1 11 21 31 41 51
| | | | | |
1 SVDDFHFLAV LGKGSFGKVL LAELRDTTYY YAIKCLKKDV VLEDDDVDST LIERKVLALG 60
61 TKHPYLCHLF CTFQTESHLF FVMEYLNGGD LMFHIQESGR FSEERARFYG AEIISGLKFL 120
121 HKKGIIYRDL KLDNVLLDYE GHVRIADFGM CKLQIYLDKT ADSFCGTPDY MAPEIIKGEK 180
181 YNQNVDWWSF GVLLYEMLIG QSPFSGCDED ELFWSICNEI PWFPVYISAE ATGILKGLLE 240
241 KDYTKRIGSQ YSPAGDIADH IFFRPIDWGL LEKRQIEPPF KPQVKHPLDT QYFDRVFTRE 300
301 RVRLTPIDKE ILASMDQKQF HGFTYTNPHI TLD
|
| Detection Method: | |
| Confidence: | 97.221849 |
| Match: | 2i0eA |
| Description: | No description for 2i0eA was found. |
