| Protein: | gi|62733975, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 491 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|62733975, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
357.0 | [0..6] | [491..4] |
|
Region A: Residues: [1-272] |
1 11 21 31 41 51
| | | | | |
1 MGSTSRPVDD EVLDAATGVH YSALRLEELN MNGSVSGEDQ PTTSGVENGH QEPFVIGVAG 60
61 GASSGKSTVC KMIIDQLRDQ RVVVVTQESF YYGLSDEELV HVHDYNFDHP DAFDTELLLS 120
121 CMENLKHGKA VDIPNYNFKT YKSVASARKV NPSDVIILEG ILVFHDSRVR DLMNMKIFVD 180
181 TDADVRLTRR IRRDTIEKGR DIKTVLDQYS KFVKPAFEDF ILPTKKYADI IIPRGGDNDV 240
241 AIDLIVQHIR TKLGQHDLCK VHPNLYVIQT TY
|
| Detection Method: |  |
| Confidence: | 37.522879 |
| Match: | 1xrjA |
| Description: | Rapid structure determination of human uridine-cytidine kinase 2 using a conventional laboratory X-ray source and a single samarium derivative |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nucleobase, nucleoside, nucleotide kinase activity | 3.66392587433723 | bayes_pls_golite062009 |
| nucleotide kinase activity | 2.24094813695083 | bayes_pls_golite062009 |
| binding | 2.05253348982328 | bayes_pls_golite062009 |
| phosphotransferase activity, phosphate group as acceptor | 1.96697952975573 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 1.2935968641033 | bayes_pls_golite062009 |
| ribonucleotide binding | 1.2935353851804 | bayes_pls_golite062009 |
| purine nucleotide binding | 1.29138695385133 | bayes_pls_golite062009 |
| nucleotide binding | 1.28669586915546 | bayes_pls_golite062009 |
| nucleic acid binding | 1.08697924060619 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| ATP binding | 0.98146619596929 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.949788783884952 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.931486373329219 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 0.76790260478583 | bayes_pls_golite062009 |
| DNA binding | 0.702147676354075 | bayes_pls_golite062009 |
| kinase activity | 0.691112783105676 | bayes_pls_golite062009 |
| hydrolase activity | 0.675720320783251 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 0.552505397412384 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.499834566483656 | bayes_pls_golite062009 |
| adenylate kinase activity | 0.447752711852745 | bayes_pls_golite062009 |
| transcription regulator activity | 0.287777990975748 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 0.252249285455578 | bayes_pls_golite062009 |
| helicase activity | 0.0775311459068899 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.0430764033739892 | bayes_pls_golite062009 |
| protein kinase activity | 0.0364322017534667 | bayes_pls_golite062009 |
|
Region A: Residues: [273-491] |
1 11 21 31 41 51
| | | | | |
1 QIRGMHTIIR DAATTTHDFI FYADRLIRLV VEHGLGHLPF KEKQVITPTG SVYTGVEFSK 60
61 RLCGISVIRS GESMENALRA CCKGIKIGKI LIHREGDNGK QLIYHNVPKD IANRHVLLLD 120
121 PILGTGNSAV QAISLLLKKG VQETNIIFLN LISAPQGVHV VSKRFPRVKI VTSEIDFGLN 180
181 DDFRVIPGMG EFGDRYFGTD DYQSSTPFFC DEKNRVRLL
|
| Detection Method: | |
| Confidence: | 46.69897 |
| Match: | 1bd3D |
| Description: | Uracil PRTase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| uracil phosphoribosyltransferase activity | 3.97944228585882 | bayes_pls_golite062009 |
| transferase activity, transferring glycosyl groups | 3.91023158228049 | bayes_pls_golite062009 |
| transferase activity | 3.88709784255536 | bayes_pls_golite062009 |
| adenine phosphoribosyltransferase activity | 3.07502596276449 | bayes_pls_golite062009 |
| hypoxanthine phosphoribosyltransferase activity | 2.97347277288245 | bayes_pls_golite062009 |
| transferase activity, transferring pentosyl groups | 2.53679639481311 | bayes_pls_golite062009 |
| catalytic activity | 2.30431811394775 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.70397251269162 | bayes_pls_golite062009 |
| nucleobase binding | 1.28671115202467 | bayes_pls_golite062009 |
| purine binding | 1.24786927434743 | bayes_pls_golite062009 |
| ribose phosphate diphosphokinase activity | 0.947697983706416 | bayes_pls_golite062009 |
| diphosphotransferase activity | 0.749909396904601 | bayes_pls_golite062009 |
| binding | 0.691442295634288 | bayes_pls_golite062009 |
| nucleic acid binding | 0.552133387792911 | bayes_pls_golite062009 |
| DNA binding | 0.439741935655503 | bayes_pls_golite062009 |
| transcription regulator activity | 0.396538943915776 | bayes_pls_golite062009 |
| amidophosphoribosyltransferase activity | 0.360901350940423 | bayes_pls_golite062009 |
| orotate phosphoribosyltransferase activity | 0.148898393751978 | bayes_pls_golite062009 |
