| Protein: | Hsf-PB |
| Organism: | Drosophila melanogaster |
| Length: | 715 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Hsf-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
550.0 | [0..1] | [715..1] |
|
Region A: Residues: [1-153] |
1 11 21 31 41 51
| | | | | |
1 MSRSRSSAKA VQFKHESEEE EEDEEEQLPS RRMHSYGDAA AIGSGVPAFL AKLWRLVDDA 60
61 DTNRLICWTK DGQSFVIQNQ AQFAKELLPL NYKHNNMASF IRQLNMYGFH KITSIDNGGL 120
121 RFDRDEIEFS HPFFKRNSPF LLDQIKRKIS NNK
|
| Detection Method: |  |
| Confidence: | 38.522879 |
| Match: | 1hksA |
| Description: | SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN OF DROSOPHILA HEAT SHOCK TRANSCRIPTION FACTOR |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 5.55329976718261 | bayes_pls_golite062009 |
| DNA binding | 5.08959163553491 | bayes_pls_golite062009 |
| nucleic acid binding | 4.99681957904233 | bayes_pls_golite062009 |
| transcription factor activity | 4.33152142980289 | bayes_pls_golite062009 |
| transcription activator activity | 3.70589483230587 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 3.58179858678904 | bayes_pls_golite062009 |
| binding | 3.52874320222492 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.60738445921725 | bayes_pls_golite062009 |
| transcription repressor activity | 2.22485867684613 | bayes_pls_golite062009 |
| protein binding | 1.80415286835431 | bayes_pls_golite062009 |
| transcription factor binding | 0.85714789329232 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 0.66743181561551 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity, enhancer binding | 0.23177057841536 | bayes_pls_golite062009 |
| structural molecule activity | 0.111941063082739 | bayes_pls_golite062009 |
| specific transcriptional repressor activity | 0.0565989703351002 | bayes_pls_golite062009 |
|
Region A: Residues: [154-248] |
1 11 21 31 41 51
| | | | | |
1 NGDDKGVLKP EAMSKILTDV KVMRGRQDNL DSRFSAMKQE NEVLWREIAS LRQKHAKQQQ 60
61 IVNKLIQFLI TIVQPSRNMS GVKRHVQLMI NNTPE
|
| Detection Method: | |
| Confidence: | 10.102373 |
| Match: | PF00447.8 |
| Description: | No description for PF00447.8 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [249-475] |
1 11 21 31 41 51
| | | | | |
1 IDRARTTSET ESESGGGPVI HELREELLDE VMNPSPAGYT AASHYDQESV SPPAVERPRS 60
61 NMSISSHNVD YSNQSVEDLL LQGNGTAGGN ILVGGAASPM AQSVSQSPAQ HDVYTVTEAP 120
121 DSHVQEVPNS PPYYEEQNVL TTPMVREQEQ QKRQQLKENN KLRRQAGDVI LDAGDILVDS 180
181 SSPKAQRTSI QHSTQPDVMV QPMIIKSEPE NSSGLMDLMT PANDLYS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [476-608] |
1 11 21 31 41 51
| | | | | |
1 VNFISEDMPT DIFEDALLPD GVEEAAKLDQ QQKFGQSTVS SGKFASNFDV PTNSTLLDAN 60
61 QASTSKAAAK AQASEEEGMA VAKYSGAENG NNRDTNNSQL LRMASVLVDQ KNTNSSRISH 120
121 NQAANSYCCS DEL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [609-715] |
1 11 21 31 41 51
| | | | | |
1 HGHLESMQDE LETLKDLLRG DGVAIDQNML MGLFNDSDLM DNYGLSFPND SISSEKKAPS 60
61 GSELISYQPM YDLSDILDTD DGNNDQEASR RQMQTQSSVL NTPRHEL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
