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View Structure Prediction Details

Protein: ptps-1
Organism: Caenorhabditis elegans
Length: 137 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ptps-1.

Description E-value Query
Range
Subject
Range
gi|109108666 - gi|109108666|ref|XP_001108264.1| PREDICTED: 6-pyruvoyltetrahydropterin synthase [Macaca mulatta]
176.0 [0..6] [136..14]

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Predicted Domain #1
Region A:
Residues: [1-137]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPIVTMERVD SFSAAHRLHS EKLSDAENKE TFGKCNNSNG HGHNYVWKVK LRGEVDPTSG  60
   61 MVYDLAKLKK EMSLVLDTVD HRNLDKDVEF FKTTVSTSEN VAIYMFEKLK SVMSNPSVLY 120
  121 KVTIEETPKN IFTYKGC

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Detection Method: PSI-BLAST
Confidence: 38.69897
Match: 2g64A
Description: No description for 2g64A was found.

Predicted functions:

Term Confidence Notes
GTP cyclohydrolase I activity 4.1430878480831 bayes_pls_golite062009
cyclohydrolase activity 3.66553359909123 bayes_pls_golite062009
GTP cyclohydrolase activity 3.44912994722205 bayes_pls_golite062009
6-pyruvoyltetrahydropterin synthase activity 2.77658228107642 bayes_pls_golite062009
dihydroneopterin aldolase activity 2.51107306055654 bayes_pls_golite062009
catalytic activity 2.20788162511962 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 1.73101699306211 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 0.974891318710762 bayes_pls_golite062009
binding 0.759103762434885 bayes_pls_golite062009
protein binding 0.321209012356616 bayes_pls_golite062009
oxidoreductase activity 0.0783540825826956 bayes_pls_golite062009
urate oxidase activity 0.0294957696532921 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle