| Protein: | Rassf-PA |
| Organism: | Drosophila melanogaster |
| Length: | 806 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Rassf-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
402.0 | [0..1] | [806..1] |
|
Region A: Residues: [1-78] |
1 11 21 31 41 51
| | | | | |
1 MWKCHKCGKP VYFAERKQSI GYDWHPECLR CEECGKRLNP GQHAEHKSVP YCHVPCYGAL 60
61 FGPQLFGHGT RVESHKSY
|
| Detection Method: |  |
| Confidence: | 20.69897 |
| Match: | 1imlA |
| Description: | CYSTEINE RICH INTESTINAL PROTEIN, NMR, 48 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.32420977112004 | bayes_pls_golite062009 |
| protein binding | 1.39455913713025 | bayes_pls_golite062009 |
| transcription regulator activity | 1.18816040284456 | bayes_pls_golite062009 |
| DNA binding | 1.00346200943179 | bayes_pls_golite062009 |
| nucleic acid binding | 0.86280381479968 | bayes_pls_golite062009 |
| transcription factor activity | 0.441713135779151 | bayes_pls_golite062009 |
| transcription factor binding | 0.30385317974375 | bayes_pls_golite062009 |
| receptor activity | 0.230063209127305 | bayes_pls_golite062009 |
|
Region A: Residues: [79-138] |
1 11 21 31 41 51
| | | | | |
1 GVKGAQKPTG AQANGPPLPR DHLESKLKVY NQFYDNKSLE IRSREVNNRL VLEGALRVYW 60
61
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [139-523] |
1 11 21 31 41 51
| | | | | |
1 GVQGVIHLKE DDDQRILVRK RNSCRVSKAA NESSSDKENE ASESLAPPTT TTAEVDQLST 60
61 DVSLSESMTF DSCSLNEISE LPTTPEDASA NTTANSKEQT NGNVCNDDED TTTTDSSGTL 120
121 VEAPTASTSC VSSTLPSKLD RLEKLDWDDI DDLLQVERRH NDKDRIYETM PVKLPSSQSS 180
181 SDSSPSKTST ETTTTTESSS TQSASTNTSS TDDFMTATGS LTANTNTQNT TTVSTTETSL 240
241 DNFETCDDAT LKPIDFEDFK RSVHQDYVNG ANSFTEPNEG TLKRNQPIDP SRIHDSLKLY 300
301 GENSAMSKSF NCEHALRSID PTLINDTMNL RSSVGSPHSA QRQYALQKSG SATVTSRDQK 360
361 KPYQQGRQLF EKGINRSKSG PSCFV
|
| Detection Method: | |
| Confidence: | 0.975 |
| Match: | 1h1kI |
| Description: | THE BLUETONGUE VIRUS (BTV) CORE BINDS DSRNA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [524-671] |
1 11 21 31 41 51
| | | | | |
1 YSDSDDDDEA TLRPQRMATI RRSDIPQRYI QIQMDCYPKE NVAAASEGES SRADAPSITS 60
61 GAAAGDELTQ TEDLYTASEG VDGPDGDGSA GLHVTEDGVV LRRPPRTGAS AIKRRSGNRR 120
121 SRTKLKRRCS INGHYYNRET SFFTPPYG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [672-806] |
1 11 21 31 41 51
| | | | | |
1 SQMSVWVSSM VTTTEVINLV LEKYKVDSSP GNFSLFIVRD NGEQKRLKDD EYPLITRVTL 60
61 GPHEDVARIF LVDSRKTDEI SNEVAQFLNL SLPECRAILE RYDQELAREV AKIKERYAEL 120
121 RRRIVSRMES LKVHL
|
| Detection Method: | |
| Confidence: | 1.57 |
| Match: | 1wxaA |
| Description: | Solution Structure of Ras-binding Domain in Mouse AF-6 Protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.0688320293797 | bayes_pls_golite062009 |
| protein binding | 1.72968950672856 | bayes_pls_golite062009 |
