| Protein: | gi|50912359, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 674 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50912359, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
420.0 | [0..77] | [669..2] |
|
Region A: Residues: [1-109] |
1 11 21 31 41 51
| | | | | |
1 MARLLVLRSA PYHRSHLSAT ATFLLSPSNS KHPHSASASA SFPSTARRIL LPSPLRVPAR 60
61 AIESSPGTTK QEPTPAAGEG EAQEPPPPAA SAFEVEELGW GTQLAVKLR
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [110-321] |
1 11 21 31 41 51
| | | | | |
1 MLVAPPWKRV RKGSVLNMKL RGEISDQLKT RFSSGLSLPQ ICENFVKAAY DPRISGIYLH 60
61 IEPLRCGWGK VDEIRRHIVD FKKSGKFVVG YMPVCGEKEY YLACACGELY APPSAYVALF 120
121 GLTVQQTFLR GVLEKVGIEP EIQRIGRYKS AGDQLARKSM SNEVREMLAT LLDNIYGNWL 180
181 DTISSKHGKK KEEIEEFINS GVYQVARLKE EG
|
| Detection Method: | |
| Confidence: | 14.522879 |
| Match: | 2deoA |
| Description: | No description for 2deoA was found. |
|
Region A: Residues: [322-577] |
1 11 21 31 41 51
| | | | | |
1 WITDLLYDDE VMAMLKERVA QKDKKSLRMV DYSKYSRVSK WTLGLQGGGE QIAVIRASGS 60
61 ITRTRSPLSV PSSGIIAEQL IEKIRTVRES EKYKAVILRI DSPGGDALAS DLMWREIRLL 120
121 ADTKPVVASM SDVAASGGYY MAMAAPVIVA EKLTLTGSIG VVTGKFILQK LYERIDFNKE 180
181 IISKGRYAEL NAADQRPLRP DEAELFEKSA QNAYALFRDK AAMSRSMNVD QMETVAQGRV 240
241 WSGQDAASRG LVDSLG
|
| Detection Method: | |
| Confidence: | 46.30103 |
| Match: | 1tyfA |
| Description: | Clp protease, ClpP subunit |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 1.83198156728699 | bayes_pls_golite062009 |
| hydrolase activity | 0.0572242329620312 | bayes_pls_golite062009 |
| ligase activity | 0.0513867906493599 | bayes_pls_golite062009 |
| peptidase activity | 0.0169889411806907 | bayes_pls_golite062009 |
|
Region A: Residues: [578-674] |
1 11 21 31 41 51
| | | | | |
1 GFSQALAIAK QKANIPHDRK VQLVEISKPS PTLPEILSGI GSSLLGVDRA VKGVLQDVTS 60
61 LNGVQARMDG ILFERLEDLS GENQLLLLVK DIVNYFD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
