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Protein Overview: gi|50912359, gi|...

General Information:
Name(s) found: gi|50912359 [NCBI NR]
gi|46390611 [NCBI NR]
gi|115448437 [NCBI NR]
gi|113537529 [NCBI NR]
Description(s) found:
Found 7 descriptions.
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  • gi|50912359|ref|XP_467587.1| putative protease IV [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|46390611|dbj|BAD16095.1| putative protease IV [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115448437|ref|NP_001047998.1| Os02g0728100 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113537529|dbj|BAF09912.1| Os02g0728100 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 674 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARLLVLRSA PYHRSHLSAT ATFLLSPSNS KHPHSASASA SFPSTARRIL LPSPLRVPAR  60
   61 AIESSPGTTK QEPTPAAGEG EAQEPPPPAA SAFEVEELGW GTQLAVKLRM LVAPPWKRVR 120
  121 KGSVLNMKLR GEISDQLKTR FSSGLSLPQI CENFVKAAYD PRISGIYLHI EPLRCGWGKV 180
  181 DEIRRHIVDF KKSGKFVVGY MPVCGEKEYY LACACGELYA PPSAYVALFG LTVQQTFLRG 240
  241 VLEKVGIEPE IQRIGRYKSA GDQLARKSMS NEVREMLATL LDNIYGNWLD TISSKHGKKK 300
  301 EEIEEFINSG VYQVARLKEE GWITDLLYDD EVMAMLKERV AQKDKKSLRM VDYSKYSRVS 360
  361 KWTLGLQGGG EQIAVIRASG SITRTRSPLS VPSSGIIAEQ LIEKIRTVRE SEKYKAVILR 420
  421 IDSPGGDALA SDLMWREIRL LADTKPVVAS MSDVAASGGY YMAMAAPVIV AEKLTLTGSI 480
  481 GVVTGKFILQ KLYERIDFNK EIISKGRYAE LNAADQRPLR PDEAELFEKS AQNAYALFRD 540
  541 KAAMSRSMNV DQMETVAQGR VWSGQDAASR GLVDSLGGFS QALAIAKQKA NIPHDRKVQL 600
  601 VEISKPSPTL PEILSGIGSS LLGVDRAVKG VLQDVTSLNG VQARMDGILF ERLEDLSGEN 660
  661 QLLLLVKDIV NYFD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..109] deduced N/A No confident structure predictions are available.
    2 View Details [110..321] PSI-BLAST 14.522879 No description for 2deoA was found.
    3 View Details [322..577] PSI-BLAST 46.30103 Clp protease, ClpP subunit
    4 View Details [578..674] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • catalytic activity
    		•  1.83198156728699 bayes_pls_golite062009
  • hydrolase activity
    		•  0.0572242329620312 bayes_pls_golite062009
  • ligase activity
    		•  0.0513867906493599 bayes_pls_golite062009
  • peptidase activity
    		•  0.0169889411806907 bayes_pls_golite062009
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle