YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50912359, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARLLVLRSA PYHRSHLSAT ATFLLSPSNS KHPHSASASA SFPSTARRIL LPSPLRVPAR  60
   61 AIESSPGTTK QEPTPAAGEG EAQEPPPPAA SAFEVEELGW GTQLAVKLRM LVAPPWKRVR 120
  121 KGSVLNMKLR GEISDQLKTR FSSGLSLPQI CENFVKAAYD PRISGIYLHI EPLRCGWGKV 180
  181 DEIRRHIVDF KKSGKFVVGY MPVCGEKEYY LACACGELYA PPSAYVALFG LTVQQTFLRG 240
  241 VLEKVGIEPE IQRIGRYKSA GDQLARKSMS NEVREMLATL LDNIYGNWLD TISSKHGKKK 300
  301 EEIEEFINSG VYQVARLKEE GWITDLLYDD EVMAMLKERV AQKDKKSLRM VDYSKYSRVS 360
  361 KWTLGLQGGG EQIAVIRASG SITRTRSPLS VPSSGIIAEQ LIEKIRTVRE SEKYKAVILR 420
  421 IDSPGGDALA SDLMWREIRL LADTKPVVAS MSDVAASGGY YMAMAAPVIV AEKLTLTGSI 480
  481 GVVTGKFILQ KLYERIDFNK EIISKGRYAE LNAADQRPLR PDEAELFEKS AQNAYALFRD 540
  541 KAAMSRSMNV DQMETVAQGR VWSGQDAASR GLVDSLGGFS QALAIAKQKA NIPHDRKVQL 600
  601 VEISKPSPTL PEILSGIGSS LLGVDRAVKG VLQDVTSLNG VQARMDGILF ERLEDLSGEN 660
  661 QLLLLVKDIV NYFD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle