| Protein: | gi|125581836, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 514 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125581836, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
280.0 | [0..6] | [514..8] |
|
Region A: Residues: [1-89] |
1 11 21 31 41 51
| | | | | |
1 MTRLAVRSLV VLFLTVASPF LVAGGGGAKL NASSSSSPLY GIEFPPFNAG VADGGCDGKL 60
61 MVQGMEEVSR SPSLKLHMTH RSAAEAAAA
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [90-514] |
1 11 21 31 41 51
| | | | | |
1 GRTRKESFLD SAGKDVARIH TMLRRVAGAG GGRAATNSTP RRALAERIVA TVESGVAVGS 60
61 GEYLVDLYVG TPPRRFQMIM DTGSDLNWLQ CAPCLDCFEQ RGPVFDPAAS LSYRNVTCGD 120
121 PRCGLVAPPT APRACRRPHS DPCPYYYWYG DQSNTTGDLA LEAFTVNLTA PGASRRVDDV 180
181 VFGCGHSNRG LFHGAAGLLG LGRGALSFAS QLRAVYGHAF SYCLVDHGSS VGSKIVFGDD 240
241 DALLGHPRLN YTAFAPSAAA AADTFYYVQL KGVLVGGEKL NISPSTWDVG KDGSGGTIID 300
301 SGTTLSYFAE PAYEVIRRAF VERMDKAYPL VADFPVLSPC YNVSGVERVE VPEFSLLFAD 360
361 GAVWDFPAEN YFVRLDPDGI MCLAVLGTPR SAMSIIGNFQ QQNFHVLYDL QNNRLGFAPR 420
421 RCAEV
|
| Detection Method: | |
| Confidence: | 66.69897 |
| Match: | 2psgA |
| Description: | REFINED STRUCTURE OF PORCINE PEPSINOGEN AT 1.8 ANGSTROMS RESOLUTION |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 1.01508543827677 | bayes_pls_golite062009 |
| hydrolase activity | 0.77554493777157 | bayes_pls_golite062009 |
| peptidase activity | 0.68518523369811 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 0.43925265235199 | bayes_pls_golite062009 |
| endopeptidase activity | 0.43264884039584 | bayes_pls_golite062009 |
| aspartic-type endopeptidase activity | 0.30585066730542 | bayes_pls_golite062009 |
| aspartic-type peptidase activity | 0.30585066730542 | bayes_pls_golite062009 |
