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Protein Overview: gi|125581836, gi...

General Information:
Name(s) found: gi|50907487 [NCBI NR]
gi|46391044 [NCBI NR]
gi|215697168 [NCBI NR]
gi|125581836 [NCBI NR]
gi|115445765 [NCBI NR]
gi|113536193 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|50907487|ref|XP_465232.1| putative chloroplast nucleoid DNA binding protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|46391044|dbj|BAD15987.1| putative chloroplast nucleoid DNA binding protein [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215697168|dbj|BAG91162.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|125581836|gb|EAZ22767.1| hypothetical protein OsJ_06441 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115445765|ref|NP_001046662.1| Os02g0314600 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113536193|dbj|BAF08576.1| Os02g0314600 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 514 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRLAVRSLV VLFLTVASPF LVAGGGGAKL NASSSSSPLY GIEFPPFNAG VADGGCDGKL  60
   61 MVQGMEEVSR SPSLKLHMTH RSAAEAAAAG RTRKESFLDS AGKDVARIHT MLRRVAGAGG 120
  121 GRAATNSTPR RALAERIVAT VESGVAVGSG EYLVDLYVGT PPRRFQMIMD TGSDLNWLQC 180
  181 APCLDCFEQR GPVFDPAASL SYRNVTCGDP RCGLVAPPTA PRACRRPHSD PCPYYYWYGD 240
  241 QSNTTGDLAL EAFTVNLTAP GASRRVDDVV FGCGHSNRGL FHGAAGLLGL GRGALSFASQ 300
  301 LRAVYGHAFS YCLVDHGSSV GSKIVFGDDD ALLGHPRLNY TAFAPSAAAA ADTFYYVQLK 360
  361 GVLVGGEKLN ISPSTWDVGK DGSGGTIIDS GTTLSYFAEP AYEVIRRAFV ERMDKAYPLV 420
  421 ADFPVLSPCY NVSGVERVEV PEFSLLFADG AVWDFPAENY FVRLDPDGIM CLAVLGTPRS 480
  481 AMSIIGNFQQ QNFHVLYDLQ NNRLGFAPRR CAEV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..89] deduced N/A No confident structure predictions are available.
    2 View Details [90..514] PSI-BLAST 66.69897 REFINED STRUCTURE OF PORCINE PEPSINOGEN AT 1.8 ANGSTROMS RESOLUTION

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  1.01508543827677 bayes_pls_golite062009
  • hydrolase activity
    		•  0.77554493777157 bayes_pls_golite062009
  • peptidase activity
    		•  0.68518523369811 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.43925265235199 bayes_pls_golite062009
  • endopeptidase activity
    		•  0.43264884039584 bayes_pls_golite062009
  • aspartic-type endopeptidase activity
    		•  0.30585066730542 bayes_pls_golite062009
  • aspartic-type peptidase activity
    		•  0.30585066730542 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle