| Protein: | gi|215715252, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 267 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|215715252, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
260.0 | [0..1] | [267..1] |
|
Region A: Residues: [1-267] |
1 11 21 31 41 51
| | | | | |
1 MDPKLVEVTQ LFSRFKAAFA RNDFDTCVDL LSQLKVRLTK FPSLPPSFQQ TPNAVEELKI 60
61 ARDIYEHAVV LSVKIEDQDA FERDFCQLKP YYMDTCGIIP PSPQEYPILG LNLLRLLVQN 120
121 RIAEFHTELE LLPVTALENP CIKHAVELEQ SFMEGAYNRV LSARQAVPHE TYVYFMDLLA 180
181 KTVRDELAGC SEKGYDYMSI AEARQVLMFS SDKELHQYIA EEHPEWEVKD GSVFFQKAKE 240
241 TQPCKEIPSL QVINQTLSYA RELERIV
|
| Detection Method: |  |
| Confidence: | 2.02 |
| Match: | 1rz4A |
| Description: | Crystal Structure of Human eIF3k |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.76236644111948 | bayes_pls_golite062009 |
| hydrolase activity | 2.62777210765927 | bayes_pls_golite062009 |
| protein binding | 1.5114863464349 | bayes_pls_golite062009 |
| structural constituent of ribosome | 1.48815906385664 | bayes_pls_golite062009 |
| nucleic acid binding | 1.08079130332447 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.06350696248374 | bayes_pls_golite062009 |
| transcription repressor activity | 0.700922242779288 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.37240198519167 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.224432853777564 | bayes_pls_golite062009 |
| DNA binding | 0.180353635969032 | bayes_pls_golite062009 |
| transcription regulator activity | 0.147335771550418 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 0.142921675412538 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 0.124542865343065 | bayes_pls_golite062009 |
