| Protein: | gi|7448452 |
| Organism: | Synechocystis sp. |
| Length: | 452 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7448452.
| Description | E-value | Query Range |
Subject Range |
|
|
294.0 | [0..21] | [448..11] |
|
|
291.0 | [0..22] | [448..1] |
|
|
290.0 | [0..25] | [452..15] |
|
|
283.0 | [0..42] | [448..25] |
|
|
276.0 | [0..52] | [447..8] |
|
|
272.0 | [0..46] | [449..5] |
|
|
271.0 | [0..47] | [447..5] |
|
|
271.0 | [0..103] | [448..19] |
|
|
270.0 | [0..44] | [448..7] |
|
Region A: Residues: [1-108] |
1 11 21 31 41 51
| | | | | |
1 MSAQAVFPIA PHRADFFPRF VLSNSSANKC HQAMKDVSLH SPKQTPSKIS LAYLGLVLVG 60
61 MGIGAGGTFV LTNPQWADHL TNNSVISPLV TNQSIAPANE SLATNLQS
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [109-452] |
1 11 21 31 41 51
| | | | | |
1 RLSPREPSNF VVDVVESTGP AVVRINAQKT VKSQVPQAFN DPFLQRFFGS QMPPMPNERV 60
61 QRGTGSGFIV SNDGKIFTNA HVVDGADEVT VTLKDGRSFP GRVMGSDPST DVAVVKIEAG 120
121 DLPTVALGDS DHLQVGEWAI AIGNPLGLDN TVTTGILSAT GRRSADIGVP DKRVEFIQTD 180
181 AAINPGNSGG PLLNADGQVI GMNTAIIQNA QGIGFAIPIN KAQEIAQQLI ATGKVEHAYL 240
241 GIQMVTMTPE LQSQIRQETG MNIPVDKGVV IMQVMPNSPA AIAKLEQGDV LQSLQGQPVE 300
301 NAEQVQSLVG KLAVGDEVEL GILRNGQQQN LTVTIGALPS APPQ
|
| Detection Method: | |
| Confidence: | 62.69897 |
| Match: | 1ky9A |
| Description: | Protease Do (DegP, HtrA), C-terminal domains; Protease Do (DegP, HtrA), catalytic domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 4.45528883298499 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 4.08053412162226 | bayes_pls_golite062009 |
| endopeptidase activity | 3.78841204092284 | bayes_pls_golite062009 |
| serine-type peptidase activity | 3.58347664461084 | bayes_pls_golite062009 |
| serine hydrolase activity | 3.58106288341801 | bayes_pls_golite062009 |
| serine-type endopeptidase activity | 3.36658782366155 | bayes_pls_golite062009 |
| hydrolase activity | 2.78416408149092 | bayes_pls_golite062009 |
| catalytic activity | 1.40927913545237 | bayes_pls_golite062009 |
