| Protein: | PNP_CAUCR |
| Organism: | Caulobacter vibrioides |
| Length: | 712 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PNP_CAUCR.
| Description | E-value | Query Range |
Subject Range |
|
|
734.0 | [0..1] | [712..1] |
|
Region A: Residues: [1-712] |
1 11 21 31 41 51
| | | | | |
1 MFDIKRKTIE WGGKTLVLET GRIARQADGA VLATMGETVV LATAVFAKSQ KPGQDFFPLT 60
61 VNYQEKTFAA GKIPGGFFKR EGRPSEKETL VSRLIDRPIR PLFVKGFKNE VQVVVTVLQH 120
121 DLENDPDILG MVAASAALCL SGAPFMGPIG AARVGWVDGA YVLNPTLDEM KESKMDLVVA 180
181 GTADAVMMVE SEIQELSEEI VLGGVNFAHQ QMQAVIDAII DLAEHAAKEP FAFEPEDTDA 240
241 IKAKMKDLVG ADIAAAYKIQ KKQDRYEAVG AAKKKAIAAL GLSDENPTGY DPLKLGAIFK 300
301 ELEADVVRRG ILDTGLRIDG RDVKTVRPIL GEVGILPRTH GSALFTRGET QAIVVATLGT 360
361 GDDEQFIDAL EGTYKESFLL HYNFPPYSVG ETGRMGSPGR REIGHGKLAW RALRPMLPTK 420
421 EDFPYTIRLV SEITESNGSS SMATVCGSSL AMMDAGVPLV RPVSGIAMGL ILEQDGFAVL 480
481 SDILGDEDHL GDMDFKVAGT SEGLTSLQMD IKIAGITPAI MEQALAQAKE GRAHILGEMN 540
541 KAMDAPRADV GDFAPKIETI NIPTDKIREV IGSGGKVIRE IVATTGAKVD INDDGVVKVS 600
601 ASDGAKIKAA IDWIKSITDE AEVGKIYDGK VVKVVDFGAF VNFFGAKDGL VHVSQISNER 660
661 VAKPSDVLKE GQMVKVKLLG FDDRGKTKLS MKVVDQETGE DLSKKEAAAE EA
|
| Detection Method: |  |
| Confidence: | 153.0 |
| Match: | 1e3hA |
| Description: | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 1 and 4; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 6; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 2 and 5 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ribonuclease activity | 3.62650207668685 | bayes_pls_golite062009 |
| transcription regulator activity | 2.64513435028798 | bayes_pls_golite062009 |
| exoribonuclease activity | 2.49584565422948 | bayes_pls_golite062009 |
| 3'-5'-exoribonuclease activity | 2.48625785660839 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 2.46667410843173 | bayes_pls_golite062009 |
| RNA binding | 1.96263727771326 | bayes_pls_golite062009 |
| nucleic acid binding | 1.06121115244578 | bayes_pls_golite062009 |
| transcription termination factor activity | 1.01993495617192 | bayes_pls_golite062009 |
| binding | 0.953779727473657 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.82905129800799 | bayes_pls_golite062009 |
| ATP-dependent peptidase activity | 0.66778558090199 | bayes_pls_golite062009 |
| structural molecule activity | 0.61730676636766 | bayes_pls_golite062009 |
| carbohydrate kinase activity | 0.51810239718467 | bayes_pls_golite062009 |
| DNA binding | 0.42372608430605 | bayes_pls_golite062009 |
| 0.416217645025381 | bayes_pls_golite062009 | |
| hydrolase activity | 0.355379071501158 | bayes_pls_golite062009 |
| catalytic activity | 0.10089766806364 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.0287026367466632 | bayes_pls_golite062009 |
