YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30260468, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	471 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30260468, gi|....

Description	E-value	Query Range	Subject Range
gi\|152022867, gi... - gi\|89200081\|ref\|ZP_01178837.1\| Amidophosphoribosyl transferase [Bacillus cereus subsp. cytotoxis NVH...	0.0	[1..471]	[1..471]
gi\|74492594, gi\|... - gi\|75759927\|ref\|ZP_00739998.1\| Amidophosphoribosyltransferase [Bacillus thuringiensis serovar israel...	0.0	[1..471]	[7..477]
gi\|42779405, gi\|... - gi\|42779405\|ref\|NP_976652.1\| amidophosphoribosyltransferase [Bacillus cereus ATCC 10987], gi\|4273532...	0.0	[1..471]	[1..471]
gi\|47569939, gi\|... - gi\|47569939\|ref\|ZP_00240604.1\| amidophosphoribosyltransferase [Bacillus cereus G9241], gi\|47553385\|g... gi\|29894078, gi\|... - gi\|30018538\|ref\|NP_830169.1\| amidophosphoribosyltransferase [Bacillus cereus ATCC 14579], gi\|2989407... gi\|206736523, gi... - gi\|206967603\|ref\|ZP_03228559.1\| amidophosphoribosyltransferase [Bacillus cereus AH1134], gi\|20673652...	0.0	[1..471]	[1..471]
gi\|89157431, gi\|... - gi\|89204804\|ref\|ZP_01183380.1\| Amidophosphoribosyl transferase [Bacillus weihenstephanensis KBAB4], ... gi\|83316471, gi\|... - gi\|83316504\|gb\|ABC02429.1\| PurF [Bacillus weihenstephanensis], gi\|83316471\|gb\|ABC02410.1\| PurF [Baci...	0.0	[1..471]	[1..471]
gi\|25286957, gi\|... - pir\|\|AF1667 glutamine phosphoribosylpyrophosphate amidotransferase [imported] - Listeria innocua (st... gi\|16800946 - gi\|16800946\|ref\|NP_471214.1\| amidophosphoribosyltransferase [Listeria innocua Clip11262]	0.0	[1..471]	[1..472]
gi\|254900727, gi... - gi\|254900727\|ref\|ZP_05260651.1\| amidophosphoribosyltransferase [Listeria monocytogenes J0161], gi\|15... gi\|153198059, gi... - gi\|254832513\|ref\|ZP_05237168.1\| amidophosphoribosyltransferase [Listeria monocytogenes 10403S], gi\|1... gi\|153191235, gi... - gi\|254913788\|ref\|ZP_05263800.1\| amidophosphoribosyltransferase [Listeria monocytogenes J2818], gi\|15... gi\|254872937, gi... - gi\|254872937\|ref\|ZP_05245647.1\| amidophosphoribosyltransferase [Listeria monocytogenes FSL N1-017], ... gi\|133729816, gi... - gi\|254829479\|ref\|ZP_05234166.1\| amidophosphoribosyltransferase [Listeria monocytogenes FSL N3-165], ... gi\|254932786, gi... - gi\|254932786\|ref\|ZP_05266145.1\| amidophosphoribosyltransferase [Listeria monocytogenes HPB2262], gi\|... gi\|47017925, gi\|... - gi\|47093694\|ref\|ZP_00231447.1\| amidophosphoribosyltransferase [Listeria monocytogenes str. 4b H7858]... gi\|217333354, gi... - gi\|217964084\|ref\|YP_002349762.1\| amidophosphoribosyltransferase [Listeria monocytogenes HCC23], gi\|2... gi\|46907998, gi\|... - gi\|46907998\|ref\|YP_014387.1\| amidophosphoribosyltransferase [Listeria monocytogenes str. 4b F2365], ... gi\|224499513 - gi\|224499513\|ref\|ZP_03667862.1\| amidophosphoribosyltransferase [Listeria monocytogenes Finland 1988] gi\|47095695, gi\|... - gi\|47095695\|ref\|ZP_00233302.1\| amidophosphoribosyltransferase [Listeria monocytogenes str. 1/2a F685... gi\|254853678 - gi\|254853678\|ref\|ZP_05243026.1\| amidophosphoribosyltransferase [Listeria monocytogenes FSL R2-503] gi\|254825987 - gi\|254825987\|ref\|ZP_05230988.1\| amidophosphoribosyltransferase [Listeria monocytogenes FSL J1-194] gi\|254938175 - gi\|254938175\|ref\|ZP_05269872.1\| amidophosphoribosyltransferase [Listeria monocytogenes F6900] gi\|254880140 - gi\|254880140\|ref\|ZP_05252850.1\| amidophosphoribosyltransferase [Listeria monocytogenes FSL J2-071] gi\|255521811 - gi\|255521811\|ref\|ZP_05389048.1\| amidophosphoribosyltransferase [Listeria monocytogenes FSL J1-175] gi\|255025923 - gi\|255025923\|ref\|ZP_05297909.1\| amidophosphoribosyltransferase [Listeria monocytogenes FSL J2-003]	0.0	[1..471]	[1..472]
gi\|16411222, gi\|... - pir\|\|AH1295 glutamine phosphoribosylpyrophosphate amidotransferase [imported] - Listeria monocytogen... gi\|16803808 - gi\|16803808\|ref\|NP_465293.1\| amidophosphoribosyltransferase [Listeria monocytogenes EGD-e] gi\|224503306 - gi\|224503306\|ref\|ZP_03671613.1\| amidophosphoribosyltransferase [Listeria monocytogenes FSL R2-561]	0.0	[1..471]	[1..472]
gi\|48825158 - ref\|ZP_00286442.1\| COG0034: Glutamine phosphoribosylpyrophosphate amidotransferase [Enterococcus fae... gi\|69246319, gi\|... - gi\|69246319\|ref\|ZP_00603892.1\| Amidophosphoribosyl transferase [Enterococcus faecium DO], gi\|6819533...	0.0	[1..471]	[1..473]
gi\|94989534, gi\|... - gi\|94989534\|ref\|YP_597634.1\| amidophosphoribosyltransferase [Streptococcus pyogenes MGAS10270], gi\|9...	0.0	[1..471]	[1..473]

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Predicted Domain #1

Region A:
Residues: [1-471]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAEIKGLNE ECGVFGIWGH ENAAQVSYYG LHSLQHRGQE GAGIVVNNGE KIVGHKGLGL  60
   61 ISEVFSRGEL EGLNGKSAIG HVRYATAGGS EVANVQPLLF RFSDHSMALA HNGNLINAKM 120
  121 LRRELEAEGS IFQTSSDTEV LLHLIKRSTK DSLIESVKEA LNKVKGAFAY LLLTGNEMIV 180
  181 ALDPNGFRPL SIGKMGDAYV VASETCAFDV VGATYIRDVE PGELLIINDE GIHVDRFTNE 240
  241 VDHAICSMEY IYFARPDSNI AGINVHAARK NMGKRLAAEA PIEADVVTGV PDSSISAAIG 300
  301 YAEATGIPYE LGLIKNRYVG RTFIQPSQEL REQGVKMKLS AVRGVVEGKR VVMIDDSIVR 360
  361 GTTSKRIVRM LREAGATEVH VRIASPPLKY PCFYGIDIQT RKELIAANHT VEEIREMIGA 420
  421 DSLTFLSEDG LVDAIGRPYE GKYGGLCMAY FNGDYPTALY DYEQELLESM K

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	121.0
Match:	1ao0A
Description:	Glutamine PRPP amidotransferase, C-terminal domain; Glutamine PRPP amidotransferase, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
transferase activity	2.73727660668741	bayes_pls_golite062009
transferase activity, transferring pentosyl groups	2.53679639481311	bayes_pls_golite062009
uracil phosphoribosyltransferase activity	2.36237864658341	bayes_pls_golite062009
catalytic activity	2.30431811394775	bayes_pls_golite062009
transferase activity, transferring glycosyl groups	2.21367942706564	bayes_pls_golite062009
amidophosphoribosyltransferase activity	1.6596316647688	bayes_pls_golite062009
ribose phosphate diphosphokinase activity	1.51875493459374	bayes_pls_golite062009
adenine phosphoribosyltransferase activity	0.985266832225609	bayes_pls_golite062009
diphosphotransferase activity	0.749909396904601	bayes_pls_golite062009
hypoxanthine phosphoribosyltransferase activity	0.625087274084001	bayes_pls_golite062009
ligase activity	0.204093345072151	bayes_pls_golite062009
nucleic acid binding	0.202128134374461	bayes_pls_golite062009
orotate phosphoribosyltransferase activity	0.148898393751978	bayes_pls_golite062009
endopeptidase activity	0.0940838340168359	bayes_pls_golite062009
peptidase activity	0.0898497842822991	bayes_pls_golite062009
transcription regulator activity	0.057753538747651	bayes_pls_golite062009
binding	0.0515528196477861	bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides	0.012663147802059	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: