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View Structure Prediction Details

Protein: gi|45658051, gi|...
Organism: Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130
Length: 329 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|45658051, gi|....

Description E-value Query
Range
Subject
Range
gi|41205692 - gi|41205692|gb|AAR99612.1| dTDP-glucose 4,6-dehydratase [Geobacillus stearothermophilus]
346.0 [0..1] [326..3]

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Predicted Domain #1
Region A:
Residues: [1-329]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKALVTGGAG FIGSHLVDLL LENQFEVTVL DNFSTGRAFN LNHVKEKIDL VECDLSIQED  60
   61 WIKKFQSVDY VFHLAALADI VPSIQNPEGY FQSNVTGTLN VLQASRHYGV KRFVYAASSS 120
  121 CYGIPELYPT PETSPILPQY PYALTKRMGE ELVMHWVQVY KFPALSLRFF NVYGPRSRTS 180
  181 GTYGAVFGVF LAQKLAGKPF TVVGDGKQTR DFTYVQDVAE AVFAAAQSDK VGEIYNVGSG 240
  241 ATISVNRIVE LLKGEVTYIP KRPGEPDSTF ADIAKIKKDL KWSPKISIET GIGELLKNID 300
  301 YWREAPVWTP DKIEKATSDW FKYLGGSNS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 83.69897
Match: 1g1aA
Description: dTDP-glucose 4,6-dehydratase (RmlB)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
steroid dehydrogenase activity 3.70115036051018 bayes_pls_golite062009
steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 3.56748749904419 bayes_pls_golite062009
UDP-glucose 4-epimerase activity 2.13934644118967 bayes_pls_golite062009
catalytic activity 1.79741889688267 bayes_pls_golite062009
oxidoreductase activity, acting on CH-OH group of donors 1.03956654822048 bayes_pls_golite062009
C-3 sterol dehydrogenase (C-4 sterol decarboxylase) activity 1.03845584151228 bayes_pls_golite062009
nucleic acid binding 0.868888700854563 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 0.82673050487418 bayes_pls_golite062009
DNA binding 0.790382977752475 bayes_pls_golite062009
binding 0.784517759335365 bayes_pls_golite062009
3-alpha(17-beta)-hydroxysteroid dehydrogenase (NAD+) activity 0.744959961067911 bayes_pls_golite062009
alcohol dehydrogenase (NAD) activity 0.65743456407889 bayes_pls_golite062009
transcription regulator activity 0.613310508772122 bayes_pls_golite062009
retinol dehydrogenase activity 0.48941662111046 bayes_pls_golite062009
transcription factor activity 0.11102650759187 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle