| Protein: | gi|24375268, gi|... |
| Organism: | Shewanella oneidensis MR-1 |
| Length: | 1059 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24375268, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
1177.0 | [0..5] | [1058..74] |
|
|
1174.0 | [0..5] | [1059..74] |
|
|
1172.0 | [0..5] | [1059..98] |
|
|
1172.0 | [0..5] | [1059..98] |
|
|
1171.0 | [0..5] | [1036..74] |
|
|
1169.0 | [0..5] | [1059..77] |
|
|
1169.0 | [0..5] | [1036..74] |
|
|
1169.0 | [0..5] | [1036..74] |
|
|
1169.0 | [0..5] | [1059..76] |
|
|
1168.0 | [0..5] | [1059..76] |
|
Region A: Residues: [1-570] |
1 11 21 31 41 51
| | | | | |
1 MFKASEVLAG RYDSANLDEL FKAVTDNYIV DEEQYLSELI KLVPSSDEAI ERVTRRAHEL 60
61 VNKVRQFEKK GLMVGIDAFL QQYSLETQEG IILMCLAEAL LRIPDAATAD ALIEDKLSGA 120
121 KWDEHLSKSD SVLVNASTWG LMLTGKIVSL DKKIDGSSSN LLGRLVNRLG EPVIRQAMMA 180
181 AMKIMGKQFV LGRTMKEALK NSEDKRKLGY THSYDMLGEA ALTRKDAEKY FTDYANAITE 240
241 LGAQSYNESE SPRPTISIKL SALHPRYEVA NEDRVLTELY DTVIRLIKLA RGLNIGISID 300
301 AEEVDRLELS LKLFQKLFNS EATKGWGLLG IVVQAYSKRA LPVLVWLTRL AKEQGDEIPV 360
361 RLVKGAYWDS ELKWAQQAGE AAYPLYTRKA GTDVSYLACA RYLLSDATRG AIYPQFASHN 420
421 AQTVAAISDM AGDRNHEFQR LHGMGQELYD TILSEAGAKA VRIYAPIGAH KDLLPYLVRR 480
481 LLENGANTSF VHKLVDPKTP IESLVVHPLK TLTSYKTLAN NKIVLPIDIF GSDRKNSKGL 540
541 NMNIISEAEP FFAALDKFKS TQWQAGPLVN
|
| Detection Method: |  |
| Confidence: | 1000.0 |
| Match: | 1k87A |
| Description: | N-terminal domain of bifunctional PutA protein; Proline dehydrohenase domain of bifunctional PutA protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| oxidoreductase activity, acting on the CH-NH group of donors | 6.88732579226533 | bayes_pls_golite062009 |
| 1-pyrroline-5-carboxylate dehydrogenase activity | 6.68550231605226 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | 5.85251457886657 | bayes_pls_golite062009 |
| oxidoreductase activity | 3.26500423104107 | bayes_pls_golite062009 |
| methylenetetrahydrofolate reductase (NADPH) activity | 3.12501983452885 | bayes_pls_golite062009 |
| catalytic activity | 2.15527229494088 | bayes_pls_golite062009 |
| binding | 1.75614413431284 | bayes_pls_golite062009 |
| protein binding | 1.38007868564575 | bayes_pls_golite062009 |
| transcription regulator activity | 0.577994923694075 | bayes_pls_golite062009 |
| nucleic acid binding | 0.464400793583132 | bayes_pls_golite062009 |
| DNA binding | 0.359090400165996 | bayes_pls_golite062009 |
| transcription repressor activity | 0.0464200104039556 | bayes_pls_golite062009 |
|
Region A: Residues: [571-1059] |
1 11 21 31 41 51
| | | | | |
1 GQPLTGEHKT IVSPFDTTQT VGQVAFADKA AIEQAVSSAH AAFGSWTRTP VEVRASALQK 60
61 LADLLEENRE ELIALCTREA GKSIQDGIDE VREAVDFCRY YAVQAKKLMS KPELLPGPTG 120
121 ELNELFLQGR GVFVCISPWN FPLAIFLGQV SAALAAGNTV VAKPAEQTSI IGYRAVQLAH 180
181 QAGIPTDVLQ YLPGTGATVG NALTADERIG GVCFTGSTGT AKLINRTLAN REGAIIPLIA 240
241 ETGGQNAMVV DSTSQPEQVV NDVVSSSFTS AGQRCSALRV LFLQEDIADR VIDVLQGAMD 300
301 ELVIGNPSSI KTDVGPVIDA TAKANLDAHI DHIKQVGKLI KQMSLPAGTE NGHFVAPTAV 360
361 EIDSIKVLEK EHFGPILHVI RYKASELAHV IDEINSTGFG LTLGIHSRNE GHALEVADKV 420
421 NVGNVYINRN QIGAVVGVQP FGGQGLSGTG PKAGGPHYLT RFVTEKTRTN NITAIGGNAT 480
481 LLSLGDSDA
|
| Detection Method: | |
| Confidence: | 115.0 |
| Match: | 1uzbA |
| Description: | 1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| oxidoreductase activity, acting on the aldehyde or oxo group of donors | 5.09598561374689 | bayes_pls_golite062009 |
| oxidoreductase activity | 4.47226217021998 | bayes_pls_golite062009 |
| 1-pyrroline-5-carboxylate dehydrogenase activity | 4.35175408702761 | bayes_pls_golite062009 |
| methylmalonate-semialdehyde dehydrogenase (acylating) activity | 3.87605237828483 | bayes_pls_golite062009 |
| succinate-semialdehyde dehydrogenase [NAD(P)+] activity | 3.64672165191647 | bayes_pls_golite062009 |
| 3-chloroallyl aldehyde dehydrogenase activity | 3.37049090049734 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 3.2867555127991 | bayes_pls_golite062009 |
| glutamate-5-semialdehyde dehydrogenase activity | 3.27180265380824 | bayes_pls_golite062009 |
| benzaldehyde dehydrogenase activity | 2.99564252244797 | bayes_pls_golite062009 |
| aldehyde dehydrogenase (NAD) activity | 2.81851373615334 | bayes_pls_golite062009 |
| catalytic activity | 2.80804701752928 | bayes_pls_golite062009 |
| succinate-semialdehyde dehydrogenase activity | 2.71501590413507 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-NH group of donors | 2.70230501280821 | bayes_pls_golite062009 |
| aldehyde dehydrogenase [NAD(P)+] activity | 2.43250909158896 | bayes_pls_golite062009 |
| aminobutyraldehyde dehydrogenase activity | 2.35958138496479 | bayes_pls_golite062009 |
| malonate-semialdehyde dehydrogenase (acetylating) activity | 1.75951883819887 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | 1.6559690223037 | bayes_pls_golite062009 |
| retinal dehydrogenase activity | 1.42867174920845 | bayes_pls_golite062009 |
| electron carrier activity | 1.33390667257376 | bayes_pls_golite062009 |
| binding | 1.06673666884196 | bayes_pls_golite062009 |
| retinoid binding | 0.983782635681687 | bayes_pls_golite062009 |
| isoprenoid binding | 0.900374761028287 | bayes_pls_golite062009 |
| protein binding | 0.894945263794726 | bayes_pls_golite062009 |
| hydrolase activity | 0.799513645745266 | bayes_pls_golite062009 |
| histidinol dehydrogenase activity | 0.258030369394064 | bayes_pls_golite062009 |
| benzaldehyde dehydrogenase (NAD+) activity | 0.23487570676521 | bayes_pls_golite062009 |
