| Protein: | MGA2_YEAST |
| Organism: | Saccharomyces cerevisiae S288c |
| Length: | 1113 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MGA2_YEAST.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1113] | [1..1113] |
|
|
0.0 | [335..1011] | [93..792] |
|
|
0.0 | [335..1011] | [76..775] |
|
|
0.0 | [335..1011] | [93..800] |
|
Region A: Residues: [1-346] |
1 11 21 31 41 51
| | | | | |
1 MQQNSEFLTE TPGSDPHISQ LHANSVMESQ LLDDFLLNGS PMYQDDSMAH INIDEGANFQ 60
61 NFIKTDEGDS PNLLSFEGIG NNTHVNQNVS TPLEEEMESN RALKEEEEDE HENKVFNEKN 120
121 IGNPAHDEIV FGRKETIQSV YINPLDYLKV NAAQLPLDVE VSGLPQVSRV ENQLKLKVKI 180
181 TSETPLNQSM LYLPSDSISR EKFYLKKNIE DFSEDFKKNL LYINAFVLCA VSNRTTNVCT 240
241 KCVKREQRRA ARRKSGIADN LLWCNNINRR LVVFNNKQVF PIMKTFDNVK EFELTTRLVC 300
301 YCRHHKANNG FVILFTITDW QNRLLGKFTT TPIMITDRKP ANMDTT
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [347-524] |
1 11 21 31 41 51
| | | | | |
1 KFNNTTTSSR RQLTEEESTT EYYSTDNNQL SKDENMPFQY TYQHNPYDND SQMNNIPLKD 60
61 KNVPFPYSIS QQTDLLQNNN LSLNLSLPNQ HIPSPTSMSE EGSESFNYHH RDNDNPVRTI 120
121 SLTNIEQQSQ LNQRKRARNN LENDIGKPLF KHSFSNSISA TNTMNPALHS MQDFSMKN
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [525-682] |
1 11 21 31 41 51
| | | | | |
1 NNNNLPSINR VIPSQGPING GIEVTLLGCN FKDGLSVKFG SNLALSTQCW SETTIVTYLP 60
61 PAAYAGQVFV SITDTNNENN NDDLPQEIEI NDNKKAIFTY VDDTDRQLIE LALQIVGLKM 120
121 NGKLEDARNI AKRIVGNDSP DSGTNGNSCS KSTGPSPN
|
| Detection Method: | |
| Confidence: | 77.211549 |
| Match: | 1k1aA_ |
| Description: | bcl-3 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [683-801] |
1 11 21 31 41 51
| | | | | |
1 QHSMNLNTSV LYSDEVLIQK VIKSLNINSN ISICDSLGRT LLHLACLKNY SSLVYTLIKK 60
61 GARVNDIDSF GLTPLHFACI SGDPKIIKML LNCKVNYSLR SHNGLTAREV FIANHIHSK
|
| Detection Method: | |
| Confidence: | 77.211549 |
| Match: | 1k1aA_ |
| Description: | bcl-3 |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [802-869] |
1 11 21 31 41 51
| | | | | |
1 EIDKKQDNRD NHKFVHNDTY ISEVLSLFEE FQNGTKFTDS VETDSNYSIS RKYSQSSFNS 60
61 SLLDNESL
|
| Detection Method: | |
| Confidence: | 16.045757 |
| Match: | 1lnnA_ |
| Description: | No description for 1lnnA_ was found. |
| Term | Confidence | Notes |
| protein binding | 2.69918165732603 | bayes_pls_golite062009 |
| binding | 2.17983095277661 | bayes_pls_golite062009 |
| transcription regulator activity | 1.77275610412175 | bayes_pls_golite062009 |
| nucleic acid binding | 1.31270638552607 | bayes_pls_golite062009 |
| DNA binding | 1.1922382945387 | bayes_pls_golite062009 |
| transcription activator activity | 1.13308454180419 | bayes_pls_golite062009 |
| transcription factor activity | 0.72431748142192 | bayes_pls_golite062009 |
| transcription factor binding | 0.56378250255767 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.443598477652456 | bayes_pls_golite062009 |
| signal transducer activity | 0.177373330518427 | bayes_pls_golite062009 |
| molecular transducer activity | 0.177373330518427 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.0844768926216624 | bayes_pls_golite062009 |
|
Region A: Residues: [870-980] |
1 11 21 31 41 51
| | | | | |
1 NENLFESQSM INPTSMEIQH PTLQLFENSS YSEYDQSDFE EDGDEDLFVT DEVEKPGVAC 60
61 REEQSELLDI GSSANEPEED NGSTSLWNRV LHRINDDLPK YEDLFPLSWG K
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.214 | a.118.1 | ARM repeat |
|
Region A: Residues: [981-1059] |
1 11 21 31 41 51
| | | | | |
1 DDKLKTTNQD SIVEQSASNI ENSENSEEED YEEEEEFLKK QFNRFFQNKQ NFRNDKMLIF 60
61 FWIPLTLLLL TWFIMYKFG
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1060-1113] |
1 11 21 31 41 51
| | | | | |
1 NQDSSINHIS ELISEYLRIA LAKFLLGNER MKTAFRSKLS NLQTTRMLND LIVS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.502 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.502 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.511 | a.2.7 | tRNA-binding arm |
| View | Download | 0.475 | a.157.1 | Skp1 dimerisation domain-like |
| View | Download | 0.471 | a.30.1 | ROP protein |
| View | Download | 0.459 | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.453 | a.2.9 | C-terminal UvrC-binding domain of UvrB |
| View | Download | 0.447 | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.446 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.437 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.415 | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.413 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.397 | a.4.1 | Homeodomain-like |
| View | Download | 0.355 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.348 | d.58.8 | Viral DNA-binding domain |
| View | Download | 0.328 | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.319 | a.4.1 | Homeodomain-like |
| View | Download | 0.308 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.304 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.297 | d.58.49 | YajQ-like |
| View | Download | 0.294 | a.140.2 | SAP domain |
| View | Download | 0.291 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.254 | a.4.1 | Homeodomain-like |
| View | Download | 0.251 | a.32.1 | Transcription factor IIA (TFIIA), alpha-helical domain |
| View | Download | 0.249 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.245 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.238 | d.58.38 | Urease metallochaperone UreE, C-terminal domain |
| View | Download | 0.232 | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.232 | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.225 | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.213 | d.59.1 | Ribosomal protein L30p/L7e |
| View | Download | 0.207 | a.2.3 | Chaperone J-domain |
| View | Download | 0.206 | g.1.1 | Insulin-like |
| View | Download | 0.202 | a.32.1 | Transcription factor IIA (TFIIA), alpha-helical domain |
