Protein: | CWC16_YEAST |
Organism: | Saccharomyces cerevisiae S288c |
Length: | 278 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CWC16_YEAST.
Description | E-value | Query Range |
Subject Range |
|
1.0E-97 | [1..278] | [1..278] |
|
5.0E-74 | [1..213] | [1..213] |
|
1.0E-73 | [1..214] | [1..214] |
|
1.0E-63 | [1..208] | [1..207] |
|
1.0E-61 | [1..208] | [4..209] |
Region A: Residues: [1-212] |
1 11 21 31 41 51 | | | | | | 1 MSERKAINKY YPPDYNPLEA EKLSRKMAKK LKTMNKSHAS IRLMTPFSMR CLECNEYIPK 60 61 SRKFNGKKEL LKEKYLDSIK IYRLTISCPR CANSIAFRTD PGNSDYVMEV GGVRNYVPQK 120 121 PNDDLNAKTA VESIDETLQR LVREKEMEQN EKMGIKEQAD DKMDLLEKRL AKIQQEQEDD 180 181 EELENLRKKN LEMSQRAEMI NRSKHAQQEK AV |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Term | Confidence | Notes |
transcription regulator activity | 2.74510263950241 | bayes_pls_golite062009 |
DNA binding | 2.44566855074341 | bayes_pls_golite062009 |
binding | 2.27558039325716 | bayes_pls_golite062009 |
nucleic acid binding | 2.24669580094588 | bayes_pls_golite062009 |
transcription factor activity | 1.9022303099625 | bayes_pls_golite062009 |
sequence-specific DNA binding | 0.911347670379084 | bayes_pls_golite062009 |
RNA polymerase II transcription factor activity | 0.839985608194026 | bayes_pls_golite062009 |
transcription activator activity | 0.685318320359585 | bayes_pls_golite062009 |
protein binding | 0.606784236996154 | bayes_pls_golite062009 |
transcription factor binding | 0.50605454225389 | bayes_pls_golite062009 |
ligand-dependent nuclear receptor activity | 0.296219659608347 | bayes_pls_golite062009 |
catalytic activity | 0.133319360419662 | bayes_pls_golite062009 |
Region A: Residues: [213-278] |
1 11 21 31 41 51 | | | | | | 1 TTDDLDNLVD QVFDNHRQRT NKPGNNNDEK RTPLFNPTST KGKIQKKSSV RTNPLGIVIK 60 61 RGKSLK |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.391 | a.35.1 | lambda repressor-like DNA-binding domains |
View | Download | 0.296 | a.16.1 | S15/NS1 RNA-binding domain |
View | Download | 0.276 | d.74.2 | C-terminal domain of arginine repressor |
View | Download | 0.394 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
View | Download | 0.321 | d.26.3 | Chitinase insertion domain |
View | Download | 0.270 | a.4.1 | Homeodomain-like |
View | Download | 0.234 | a.4.5 | "Winged helix" DNA-binding domain |
View | Download | 0.233 | a.8.3 | Families 57/38 glycoside transferase middle domain |
View | Download | 0.219 | d.15.1 | Ubiquitin-like |
View | Download | 0.217 | d.74.1 | Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) |