| Protein: | GCN5_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 568 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GCN5_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
488.0 | [0..47] | [559..452] |
|
Region A: Residues: [1-213] |
1 11 21 31 41 51
| | | | | |
1 MDSHSSHLNA ANRSRSSQTP SPSHSASASV TSSLHKRKLA ATTAANAAAS EDHAPPSSSF 60
61 PPSSFSADTR DGALTSNDEL ESISARGADT DSDPDESEDI VVDDDEDEFA PEQDQDSSIR 120
121 TFTAARLDSS SGVNGSSRNT KLKTESSTVK LESSDGGKDG GSSVVGTGVS GTVGGSSISG 180
181 LVPKDESVKV LAENFQTSGA YIAREEALKR EEQ
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [214-371] |
1 11 21 31 41 51
| | | | | |
1 AGRLKFVCYS NDSIDEHMMC LIGLKNIFAR QLPNMPKEYI VRLLMDRKHK SVMVLRGNLV 60
61 VGGITYRPYH SQKFGEIAFC AITADEQVKG YGTRLMNHLK QHARDVDGLT HFLTYADNNA 120
121 VGYFVKQGFT KEIYLEKDVW HGFIKDYDGG LLMECKID
|
| Detection Method: | |
| Confidence: | 75.221849 |
| Match: | 1yghA |
| Description: | Catalytic domain of GCN5 histone acetyltransferase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| N-acetyltransferase activity | 10.330867741687 | bayes_pls_golite062009 |
| histone acetyltransferase activity | 10.2385402730839 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 10.2385402730839 | bayes_pls_golite062009 |
| N-acyltransferase activity | 10.2097972775096 | bayes_pls_golite062009 |
| acetyltransferase activity | 9.5414870492393 | bayes_pls_golite062009 |
| acyltransferase activity | 8.84144467104026 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups other than amino-acyl groups | 8.80032457938662 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups | 8.58458341779614 | bayes_pls_golite062009 |
| 7.30820970670781 | bayes_pls_golite062009 | |
| 3.86052919290021 | bayes_pls_golite062009 | |
| H3 histone acetyltransferase activity | 3.27931674770011 | bayes_pls_golite062009 |
| transferase activity | 2.87429355361226 | bayes_pls_golite062009 |
| catalytic activity | 1.97933499002461 | bayes_pls_golite062009 |
| binding | 1.07749536895426 | bayes_pls_golite062009 |
| glycylpeptide N-tetradecanoyltransferase activity | 0.774009286200155 | bayes_pls_golite062009 |
| myristoyltransferase activity | 0.774009286200155 | bayes_pls_golite062009 |
| histone binding | 0.582104626133107 | bayes_pls_golite062009 |
| nucleic acid binding | 0.522132859536345 | bayes_pls_golite062009 |
| protein binding | 0.283213965640071 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0766125702622449 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.0504023697864295 | bayes_pls_golite062009 |
|
Region A: Residues: [372-568] |
1 11 21 31 41 51
| | | | | |
1 PKLPYTDLSS MIRQQRKAID ERIRELSNCQ NVYPKIEFLK NEAGIPRKII KVEEIRGLRE 60
61 AGWTPDQWGH TRFKLFNGSA DMVTNQKQLN ALMRALLKTM QDHADAWPFK EPVDSRDVPD 120
121 YYDIIKDPID LKVIAKRVES EQYYVTLDMF VADARRMFNN CRTYNSPDTI YYKCATRLET 180
181 HFHSKVQAGL QSGAKSQ
|
| Detection Method: | |
| Confidence: | 30.39794 |
| Match: | 1eqfA |
| Description: | TAFII250 double bromodomain module |
Matching Structure (courtesy of the PDB): |
|
