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View Structure Prediction Details

Protein: GAGT1_ARATH
Organism: Arabidopsis thaliana
Length: 572 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GAGT1_ARATH.

Description E-value Query
Range
Subject
Range
gi|3080433, gi|7... - pir||T05001 probable gamma-glutamyltransferase (EC 2.3.2.2) T19P19.30 - Arabidopsis thaliana, gi|727...
692.0 [0..1] [572..1]

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Predicted Domain #1
Region A:
Residues: [1-572]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLVRTVTIV LFIIAFLQNA AAQKRQQSIV KSRGAVATDD GRCSVIGMRV LREGGNAIDA  60
   61 SVAAALCLGV VSPASSGIGG GAFTVVKIAG GKEIAYDSRE TAPLRATENM YGGNVDLKKK 120
  121 GALSVGVPGE VAGLFTAWKQ HGKLPWKRLV TPAEKLAEGF KISKYLYMQM NATRSDILAD 180
  181 KGLSDLFVSN GELKKPGTIC HNPKLALTLK LIGEYGPKAF YNGTVGVNLA RDIKKSGGII 240
  241 TLKDLQSYRV KIKEPLSADI LGYRVLGMPP PSSGGAAMML VLNILSQYGI PSGVSGPLGV 300
  301 HRLIEALKHA FAVRMNLGDP DFTDVTKVVS DMLSPKFAKD LKSKINDQKT FDPKYYGGMW 360
  361 NQIDDHGTSH LSIIDRERNA VSMTSTINGY FGALMLSPST GIVLNNEMDD FSIPMKSNGN 420
  421 LDVPPPAPAN FIRPGKRPLS SMSPTIVLKD GKVKAAVGAS GGANIIAGTT EVYLNHFFLK 480
  481 MDPLSSVLAP RIYHQLIPNR ASYENWTTVF NDHFEIPKAT RVVLEKKGHV LSPIAGGTIA 540
  541 QFIVQESGEN SGGRSELVAV SDPRKGGFPS GY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 171.0
Match: 2e0wA
Description: No description for 2e0wA was found.

Predicted functions:

Term Confidence Notes
gamma-glutamyltransferase activity 2.74011689892782 bayes_pls_golite062009
peptidase activity 2.6421095563902 bayes_pls_golite062009
transferase activity, transferring amino-acyl groups 2.54551748261349 bayes_pls_golite062009
hydrolase activity 2.49721930187628 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 2.32542991193149 bayes_pls_golite062009
endopeptidase activity 2.29890628841519 bayes_pls_golite062009
catalytic activity 1.19663085909195 bayes_pls_golite062009
binding 0.752066499785082 bayes_pls_golite062009
nucleoside-triphosphatase activity 0.0414061586026951 bayes_pls_golite062009
pyrophosphatase activity 0.00597086235697331 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle