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View Structure Prediction Details

Protein: gi|21592447, gi|...
Organism: Arabidopsis thaliana
Length: 225 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21592447, gi|....

Description E-value Query
Range
Subject
Range
gi|125564291 - gi|125564291|gb|EAZ09671.1| hypothetical protein OsI_31954 [Oryza sativa Indica Group]
RPE1_ORYSJ - Ribulose-phosphate 3-epimerase, cytoplasmic isoform OS=Oryza sativa subsp. japonica GN=Os09g0505700 ...
RPE1_ORYSA - Ribulose-phosphate 3-epimerase, cytoplasmic isoform (EC 5.1.3.1) (Ribulose-5-phosphate-epimerase) (C...
184.0 [0..5] [219..8]

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Predicted Domain #1
Region A:
Residues: [1-225]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSPKIAPSM LSSDFANLAA EANRMIDLGA NWLHMDIMDG HFVPNLTIGA PVIESLRKHT  60
   61 NAYLDCHLMV TNPMDYVAQM AKAGASGFTF HVEVAQDNWQ QLVEKIKSTG MRPGVALKPG 120
  121 TPVEQVYPLV EGTTPVEMVL VMTVEPGFGG QKFMPDMMDK VRALRQKYPT LDIQVDGGLG 180
  181 PSTIDTAAAA GANCIVAGSS VFGAPEPGDV ISLLRTSVEK AQPTT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.0
Match: 1h1yA
Description: D-ribulose-5-phosphate 3-epimerase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ribulose-phosphate 3-epimerase activity 3.28372503209224 bayes_pls_golite062009
catalytic activity 2.44231061702877 bayes_pls_golite062009
intramolecular oxidoreductase activity 1.86158562896415 bayes_pls_golite062009
intramolecular oxidoreductase activity, interconverting aldoses and ketoses 1.36492964250879 bayes_pls_golite062009
isomerase activity 0.935800409577999 bayes_pls_golite062009
racemase and epimerase activity, acting on carbohydrates and derivatives 0.764608070506109 bayes_pls_golite062009
orotidine-5'-phosphate decarboxylase activity 0.758594564254247 bayes_pls_golite062009
binding 0.595171555788202 bayes_pls_golite062009
racemase and epimerase activity 0.288948763149344 bayes_pls_golite062009
carboxy-lyase activity 0.1100847613283 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle