| Protein: | gi|26451312, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 897 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|26451312, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
428.0 | [0..5] | [888..85] |
|
Region A: Residues: [1-378] |
1 11 21 31 41 51
| | | | | |
1 MGASLPPKEA NLFKLIVKSY ETKQYKKGLK AADAILKKFP DHGETLSMKG LTLNCMDRKT 60
61 EAYELVRLGV KNDIKSHVCW HVLGLLYRSD REYREAIKCY RNALRIDPDN LEILRDLSLL 120
121 QAQMRDLSGF VETRQQLLTL KPNHRMNWIG FAVSQHLNAN ASKAVEILEA YEGTLEDDYP 180
181 PENELIEHTE MILYKVSLLE ESGSFDKALE ELHKKEPKIV DKLSYKEQEV SLLSKVGRLE 240
241 EANKLYRVLL SMNPDNYRYH EGLQKCLGLY SESGQYSSDQ IEKLNALYQS LSEQYTRSSA 300
301 VKRIPLDFLQ DENFKEAVAK YIKPLLTKGV PSLFSDLSSL YDHPRKPDIL EQLVVEMKHS 360
361 IGTTGSFPGS DVKEPPST
|
| Detection Method: |  |
| Confidence: | 45.221849 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.29041171814244 | bayes_pls_golite062009 |
| protein binding | 1.6279032205159 | bayes_pls_golite062009 |
| transcription regulator activity | 1.36301889945421 | bayes_pls_golite062009 |
| nucleic acid binding | 1.04482640570705 | bayes_pls_golite062009 |
| DNA binding | 1.03582297487751 | bayes_pls_golite062009 |
| RNA binding | 0.540255067346835 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups | 0.531801417356986 | bayes_pls_golite062009 |
| procollagen-proline 4-dioxygenase activity | 0.482467028485988 | bayes_pls_golite062009 |
| peptidyl-proline 4-dioxygenase activity | 0.482467028485988 | bayes_pls_golite062009 |
| peptidyl-proline dioxygenase activity | 0.482467028485988 | bayes_pls_golite062009 |
| procollagen-proline dioxygenase activity | 0.482467028485988 | bayes_pls_golite062009 |
| transcription factor activity | 0.39224150319016 | bayes_pls_golite062009 |
| unfolded protein binding | 0.38161635991367 | bayes_pls_golite062009 |
| N-acetyltransferase activity | 0.370543377804206 | bayes_pls_golite062009 |
| acetyltransferase activity | 0.246297460720215 | bayes_pls_golite062009 |
| transferase activity | 0.127854220687373 | bayes_pls_golite062009 |
| N-acyltransferase activity | 0.111824723419204 | bayes_pls_golite062009 |
|
Region A: Residues: [379-897] |
1 11 21 31 41 51
| | | | | |
1 LLWTLFFLAQ HYDRRGQYDV ALCKIDEAIA HTPTVIDLYS VKSRIMKHAG DLTAAAALAD 60
61 EARGMDLADR YINSECVKRM LQADQVPLAE KTAVLFTKEG DQLNNLHDMQ CMWYDLASGD 120
121 SYFRQGDLGR ALKKFLAVEK HYADISEDQF DFHSYCLRKM TLRSYVDMLK FQDRLHSFPY 180
181 FHKAAIRAIR CYLKLHDSPK STAGEDEMSK LAPAQKKKIK KQKKAEARAK KEAESKSEES 240
241 TASGASKSGK RNVKPVDPDP HGQKLIQVEE PMAEASKYLR LLQKHSPNSL ETHLLSFEVN 300
301 MRKQKFLLAF QAVKQLLKLG AENPDSHRSL VKFFLMTESI SAPTTEAEKL RWRVLEAERP 360
361 SISQLQNKSL MEANKEFLGR HEDSLVHRAA YAEMLYILDP SKKTEAIKII EDSTNKVVQT 420
421 NEALGQAREW KLKDCIAVHT LLDTVLLDSQ AASRWKSRCA EYFPCSTHFE GKHCSLMPDS 480
481 VYNSSRKSNE NGDTPNHPMG QTELSDGQLE AFKSLSVAT
|
| Detection Method: | |
| Confidence: | 29.045757 |
| Match: | 2gw1A |
| Description: | No description for 2gw1A was found. |
