| Protein: | AGD4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 775 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AGD4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
534.0 | [0..1] | [769..1] |
|
Region A: Residues: [1-425] |
1 11 21 31 41 51
| | | | | |
1 MATFINLEDS PMFQKQVCSL EGTADELKDR CQKLYKGVKK FMGTLGEASK GESAFAACLE 60
61 EFGGGPDDPI SLSIGGPVIS KFINALRELA SYKEFLCSQV EHVLLERLMN FISVDLQEAK 120
121 ESRHRFDKAA HSYDQSREKF VSLKKNTRGE IVAELEEDLE NSKSTFEKSR FNLVNSLMTI 180
181 EAKKKYEFLE SISAIMDAHL RYFKLGYDLL NQLEPFIHQI LTYAQQSKEQ SKIEQDRLAR 240
241 RIQEFRTQSE LDSQQLVANA ESSGANGNRV GGNIPYKNTE TSLTADKEVI KQGYLLKRSS 300
301 SLRTDWKRKF FVLDSHGSMY YYRTNGNKSM GSHHHYSGSS DHNTGVFGRF RARHNRSGSL 360
361 TEGSLGYNTI DLRTSLIKLD AEDMDLRLCF RIISPQKTYT LQAENGADRM DWVNKITKAI 420
421 GTLLN
|
| Detection Method: |  |
| Confidence: | 62.045757 |
| Match: | 2elbA |
| Description: | No description for 2elbA was found. |
| Term | Confidence | Notes |
| cytoskeletal protein binding | 3.03613378654125 | bayes_pls_golite062009 |
| actin binding | 3.00914116198279 | bayes_pls_golite062009 |
| binding | 2.50303824442522 | bayes_pls_golite062009 |
| GTPase binding | 2.4109827282693 | bayes_pls_golite062009 |
| small GTPase binding | 2.35000142917744 | bayes_pls_golite062009 |
| protein binding | 2.1446140694885 | bayes_pls_golite062009 |
| actin filament binding | 1.90278181549871 | bayes_pls_golite062009 |
| SH3 domain binding | 1.01300075742025 | bayes_pls_golite062009 |
| profilin binding | 0.71636159822267 | bayes_pls_golite062009 |
| phospholipid binding | 0.289747621686826 | bayes_pls_golite062009 |
| transporter activity | 0.0356867444078989 | bayes_pls_golite062009 |
| phosphoinositide binding | 0.00504532763036469 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 0.00375566629887814 | bayes_pls_golite062009 |
|
Region A: Residues: [426-775] |
1 11 21 31 41 51
| | | | | |
1 SHFLQQSPVR YLDKDNSSSA PANAVVSGDQ IRHNDSRQNI GDDVSTILRG LPGNNACAEC 60
61 NAPEPDWASL NLGVLLCIQC SGVHRNLGVH ISKVRSLSLD VKVWEPTILD LFRNLGNVYC 120
121 NSLWEGLLHL DDDCEDGSAL SHASVSKPCP EDSFSVKEKY ILGKYLEKAL VIKDESEANL 180
181 SAASRIWEAV QSRNIREIYR LIVTTGDVNI INTKFDDITD IDAYHHIDAA EKAVKKRHDP 240
241 TVCQRIKESN EPRSCLQGCS LLHVACHIGD SVLLELLLQF GADLNIRDYH GRTPLHHCIS 300
301 SGNHKFAKIL LRRGARPSIE DDGGLSVLER AMEMGAITDE ELFLLLAECA
|
| Detection Method: | |
| Confidence: | 55.69897 |
| Match: | 1n11A |
| Description: | Ankyrin-R |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| cytoskeletal protein binding | 2.85681263546298 | bayes_pls_golite062009 |
| binding | 1.82139512362868 | bayes_pls_golite062009 |
| protein binding | 1.6716587413544 | bayes_pls_golite062009 |
| actin binding | 1.39613805702117 | bayes_pls_golite062009 |
| actin filament binding | 0.779030113223383 | bayes_pls_golite062009 |
