| Protein: | GLYC7_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 598 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GLYC7_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
454.0 | [0..21] | [598..1] |
|
Region A: Residues: [1-84] |
1 11 21 31 41 51
| | | | | |
1 MDLSRSQTNF QLGFGCSHAS MTPTPTPRAP IADDSINLQV DQSFRSLPTT FSPIPLQLLE 60
61 QKAEKTTTVD EPKKDGGGGG DQKE
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [85-598] |
1 11 21 31 41 51
| | | | | |
1 DEHFRILGHH MCLKRQRDCP LLLTQSKHPK RSSIGDSDLE SRRAAVRAWG DQPIHLADPD 60
61 IHELMEKEKQ RQVRGIELIA SENFVCRAVM EALGSHLTNK YSEGMPGARY YTGNQYIDQI 120
121 ENLCIERALT AFGLESDKWG VNVQPYSCTS ANFAVYTGLL LPGERIMGLD SPSGGHMSHG 180
181 YCTPGGKKIS AASIFFESFP YKVNPQTGYI DYDKLEDKAL DYRPKILICG GSSYPRDWDF 240
241 ARVRQIADKC GAVLMCDMAH ISGLVATKEC SNPFDHCDIV TSTTHKGLRG PRGGIIFYRR 300
301 GPKIRKQGHH SSHCDTSTHY DLEEKINFAV FPSLQGGPHN NHIAALAIAL KQVATPEYKA 360
361 YIQQMKKNAQ ALAAALLRRK CRLVTGGTDN HLLLWDLTPM GLTGKVYEKV CEMCHITLNK 420
421 TAIFGDNGTI SPGGVRIGTP AMTTRGCIES DFETMADFLI KAAQITSALQ REHGKSHKEF 480
481 VKSLCTNKDI AELRNRVEAF ALQYEMPASL IRIE
|
| Detection Method: | |
| Confidence: | 93.522879 |
| Match: | 2a7vA |
| Description: | Human mitochondrial serine hydroxymethyltransferase 2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| L-aspartate:2-oxoglutarate aminotransferase activity | 3.359406422625 | bayes_pls_golite062009 |
| glycine dehydrogenase (decarboxylating) activity | 3.2128372762799 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor | 3.2128372762799 | bayes_pls_golite062009 |
| transferase activity | 2.59075614411581 | bayes_pls_golite062009 |
| 5-aminolevulinate synthase activity | 2.47911083054773 | bayes_pls_golite062009 |
| catalytic activity | 2.29878871754893 | bayes_pls_golite062009 |
| O-phospho-L-serine:2-oxoglutarate aminotransferase activity | 2.1692959843619 | bayes_pls_golite062009 |
| transcription regulator activity | 1.67701710033155 | bayes_pls_golite062009 |
| DNA binding | 1.4774443071095 | bayes_pls_golite062009 |
| nucleic acid binding | 1.39741122443159 | bayes_pls_golite062009 |
| transferase activity, transferring nitrogenous groups | 1.28316822767388 | bayes_pls_golite062009 |
| transaminase activity | 1.24990480711889 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups | 1.19150094103499 | bayes_pls_golite062009 |
| transcription factor activity | 1.15775909410582 | bayes_pls_golite062009 |
| N-succinyltransferase activity | 1.14675852378654 | bayes_pls_golite062009 |
| binding | 1.09053123792737 | bayes_pls_golite062009 |
| structural molecule activity | 0.754675308623467 | bayes_pls_golite062009 |
| methyltransferase activity | 0.681623261233707 | bayes_pls_golite062009 |
| vitamin binding | 0.66463470119531 | bayes_pls_golite062009 |
| protein binding | 0.613130945854863 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 0.60304280865376 | bayes_pls_golite062009 |
| L-allo-threonine aldolase activity | 0.500744432308415 | bayes_pls_golite062009 |
| glycine hydroxymethyltransferase activity | 0.271623203801431 | bayes_pls_golite062009 |
| pyridoxal phosphate binding | 0.16957228630576 | bayes_pls_golite062009 |
| vitamin B6 binding | 0.16957228630576 | bayes_pls_golite062009 |
