Protein: | GMK3_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 282 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GMK3_ARATH.
Description | E-value | Query Range |
Subject Range |
|
248.0 | [0..2] | [279..305] |
Region A: Residues: [1-75] |
1 11 21 31 41 51 | | | | | | 1 MIRKLCSSFS RSIIFPNKPI FIPRSFPQPL RHSSALSYSS LKMTDTHIPG NPNSSPIQSP 60 61 TKPESLRSLE FQLGS |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [76-282] |
1 11 21 31 41 51 | | | | | | 1 SFTADPIIPP PNQIVIVISG PSGVGKDAVI NKLREVREGL HFVVTATSRP MRPGEVDGKD 60 61 YFFVSRDQFL SMVENEELLE YALVYGEYKG IPKKQIQEFM AKGEDIVLRV DIQGAQTLRR 120 121 ILGNSAVFIF LVAESELAMV ERLIDRKTES QEELLVRVAT AREEVRHLKN FDYVVVNAKG 180 181 RLDDAVNRVE SIIDAEKSKV HQRIVRI |
Detection Method: | |
Confidence: | 33.69897 |
Match: | 1s96A |
Description: | The 2.0 A X-ray structure of Guanylate Kinase from E.coli |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
nucleobase, nucleoside, nucleotide kinase activity | 3.66392587433723 | bayes_pls_golite062009 |
hydrogen ion transporting ATP synthase activity, rotational mechanism | 3.47528445676761 | bayes_pls_golite062009 |
hydrogen ion transmembrane transporter activity | 2.55741461337855 | bayes_pls_golite062009 |
substrate-specific transporter activity | 2.54103332067513 | bayes_pls_golite062009 |
monovalent inorganic cation transmembrane transporter activity | 2.40650518173039 | bayes_pls_golite062009 |
nucleotide kinase activity | 2.24094813695083 | bayes_pls_golite062009 |
kinase activity | 2.0779386406753 | bayes_pls_golite062009 |
phosphotransferase activity, phosphate group as acceptor | 1.96697952975573 | bayes_pls_golite062009 |
substrate-specific transmembrane transporter activity | 1.92480060698169 | bayes_pls_golite062009 |
binding | 1.89648142312455 | bayes_pls_golite062009 |
ion transmembrane transporter activity | 1.69194088788064 | bayes_pls_golite062009 |
inorganic cation transmembrane transporter activity | 1.60317778681063 | bayes_pls_golite062009 |
cation transmembrane transporter activity | 1.48327844851166 | bayes_pls_golite062009 |
nucleic acid binding | 1.08697924060619 | bayes_pls_golite062009 |
catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
nucleotide binding | 0.828524126097217 | bayes_pls_golite062009 |
purine ribonucleotide binding | 0.810407092593521 | bayes_pls_golite062009 |
ribonucleotide binding | 0.810379637652019 | bayes_pls_golite062009 |
purine nucleotide binding | 0.805605269661092 | bayes_pls_golite062009 |
DNA binding | 0.702147676354075 | bayes_pls_golite062009 |
adenylate kinase activity | 0.447752711852745 | bayes_pls_golite062009 |
hydrolase activity | 0.420858111948277 | bayes_pls_golite062009 |
transcription regulator activity | 0.287777990975748 | bayes_pls_golite062009 |
helicase activity | 0.0775311459068899 | bayes_pls_golite062009 |