| Protein: | gi|194198345, gi... |
| Organism: | Drosophila simulans |
| Length: | 374 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|194198345, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
152.0 | [0..1] | [374..1] |
|
Region A: Residues: [1-190] |
1 11 21 31 41 51
| | | | | |
1 MTMSTNNCES MTSYFTNSYM GADMHHGHYP GNGVTDLDAQ QMHHYSQNAN HQGNMPYPRF 60
61 PPYDRMPYYN GQGMDQQQQH QVYSRPDSPS SQVGGVMPQA QTNGQLGVPQ QQQQQQQQPS 120
121 QNQQQQQAQQ APQQLQQQLP QVTQQVTHPQ QQQQQPVVYA SCKLQAAVGG LGMVPEGGSP 180
181 PLVDQMSGHH
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [191-295] |
1 11 21 31 41 51
| | | | | |
1 MNAQMTLPHH MGHPQAQLGY TDVGVPDVTE VHQNHHNMGM YQQQSGVPPV GAPPQGMMHQ 60
61 GQGPPQMHQG HPGQHTPPSQ NPNSQSSGMP SPLYPWMRSQ FERKR
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [296-374] |
1 11 21 31 41 51
| | | | | |
1 GRQTYTRYQT LELEKEFHFN RYLTRRRRIE IAHALCLTER QIKIWFQNRR MKWKKENKTK 60
61 GEPGSGGEGD EITPPNSPQ
|
| Detection Method: | |
| Confidence: | 25.30103 |
| Match: | 1homA |
| Description: | DETERMINATION OF THE THREE-DIMENSIONAL STRUCTURE OF THE ANTENNAPEDIA HOMEODOMAIN FROM DROSOPHILA IN SOLUTION BY 1H NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 2.6809639302471 | bayes_pls_golite062009 |
| DNA binding | 2.45264254102339 | bayes_pls_golite062009 |
| nucleic acid binding | 2.32767577674158 | bayes_pls_golite062009 |
| binding | 2.12643314274039 | bayes_pls_golite062009 |
| transcription factor activity | 1.9610710007594 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.71974400731667 | bayes_pls_golite062009 |
| protein binding | 0.57484570028668 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.328460252819506 | bayes_pls_golite062009 |
| transcription repressor activity | 0.245215140763955 | bayes_pls_golite062009 |
| transcription activator activity | 0.0177888191364471 | bayes_pls_golite062009 |
