| Protein: | gi|220948282 |
| Organism: | synthetic construct |
| Length: | 271 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|220948282.
| Description | E-value | Query Range |
Subject Range |
|
|
236.0 | [0..19] | [269..188] |
|
|
235.0 | [0..16] | [269..133] |
|
|
234.0 | [0..16] | [269..131] |
|
|
232.0 | [0..18] | [269..167] |
|
|
230.0 | [0..18] | [269..164] |
|
Region A: Residues: [1-271] |
1 11 21 31 41 51
| | | | | |
1 MKLFVFLACL AVASAGVVPS ESARAVPVKD MPRAGKIEGR ITNGYPAYEG KIPYIVGLSF 60
61 NDGGYWCGGS IIDHTWVLTA AHCTNSANHV LIYFGASFRH EAQYTHWVSR SDMIQHPDWN 120
121 DFLNNDIALI RIPHVDFWSL VNKVELPSYN DRYNSYSGWW AVASGWGLTD NNSGMSNYLN 180
181 CVDVQIIDNN DCRNYYGSNY ITDNTICINT DGGKSSCSGD SGGPLVLHDN NRIVGIVSFG 240
241 SGEGCTAGRP AGFTRVTGYL DWIRDHTGIV Y
|
| Detection Method: |  |
| Confidence: | 50.045757 |
| Match: | 1hylA |
| Description: | HL collagenase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 5.91209560688646 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 5.52773635813967 | bayes_pls_golite062009 |
| serine hydrolase activity | 5.5105092190926 | bayes_pls_golite062009 |
| serine-type peptidase activity | 5.49703869306079 | bayes_pls_golite062009 |
| serine-type endopeptidase activity | 5.39623690248556 | bayes_pls_golite062009 |
| endopeptidase activity | 5.32070018460528 | bayes_pls_golite062009 |
| hydrolase activity | 4.40346950809697 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 2.01328116441763 | bayes_pls_golite062009 |
| nucleic acid binding | 1.73928761064649 | bayes_pls_golite062009 |
| DNA binding | 1.61536775064425 | bayes_pls_golite062009 |
| heparin binding | 1.48285358055737 | bayes_pls_golite062009 |
| catalytic activity | 1.40927913545237 | bayes_pls_golite062009 |
| polysaccharide binding | 1.34665327732001 | bayes_pls_golite062009 |
| binding | 1.30738106455622 | bayes_pls_golite062009 |
| protein binding | 1.30414885212044 | bayes_pls_golite062009 |
| fucose binding | 1.28001086938735 | bayes_pls_golite062009 |
| calcium-dependent protein binding | 1.10244132298625 | bayes_pls_golite062009 |
| growth factor activity | 0.848900101748605 | bayes_pls_golite062009 |
| receptor binding | 0.79054390509229 | bayes_pls_golite062009 |
| receptor activity | 0.672901978440235 | bayes_pls_golite062009 |
| molecular transducer activity | 0.437134795470683 | bayes_pls_golite062009 |
| signal transducer activity | 0.437134795470683 | bayes_pls_golite062009 |
| thrombospondin receptor activity | 0.126941350425071 | bayes_pls_golite062009 |
