| Protein: | gi|221318794 |
| Organism: | Bacillus subtilis subsp. subtilis str. JH642 |
| Length: | 705 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221318794.
| Description | E-value | Query Range |
Subject Range |
|
|
721.0 | [0..1] | [703..1] |
|
Region A: Residues: [1-705] |
1 11 21 31 41 51
| | | | | |
1 MGQEKHVFTI DWAGRTLTVE TGQLAKQANG AVMIRYGDTA VLSTATASKE PKPLDFFPLT 60
61 VNYEERLYAV GKIPGGFIKR EGRPSEKAVL ASRLIDRPIR PLFADGFRNE VQVISIVMSV 120
121 DQNCSSEMAA MFGSSLALSV SDIPFEGPIA GVTVGRIDDQ FIINPTVDQL EKSDINLVVA 180
181 GTKDAINMVE AGADEVPEEI MLEAIMFGHE EIKRLIAFQE EIVAAVGKEK SEIKLFEIDE 240
241 ELNEKVKALA EEDLLKAIQV HEKHAREDAI NEVKNAVVAK FEDEEHDEDT IKQVKQILSK 300
301 LVKNEVRRLI TEEKVRPDGR GVDQIRPLSS EVGLLPRTHG SGLFTRGQTQ ALSVCTLGAL 360
361 GDVQILDGLG VEESKRFMHH YNFPQFSVGE TGPMRGPGRR EIGHGALGER ALEPVIPSEK 420
421 DFPYTVRLVS EVLESNGSTS QASICASTLA MMDAGVPIKA PVAGIAMGLV KSGEHYTVLT 480
481 DIQGMEDALG DMDFKVAGTE KGVTALQMDI KIEGLSREIL EEALQQAKKG RMEILNSMLA 540
541 TLSESRKELS RYAPKILTMT INPDKIRDVI GPSGKQINKI IEETGVKIDI EQDGTIFISS 600
601 TDESGNQKAK KIIEDLVREV EVGQLYLGKV KRIEKFGAFV EIFSGKDGLV HISELALERV 660
661 GKVEDVVKIG DEILVKVTEI DKQGRVNLSR KAVLREEKEK EEQQS
|
| Detection Method: |  |
| Confidence: | 152.0 |
| Match: | 1e3hA |
| Description: | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 1 and 4; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 6; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 2 and 5 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| exoribonuclease activity | 7.55877202113513 | bayes_pls_golite062009 |
| ribonuclease activity | 7.54644729272203 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 7.5310318714913 | bayes_pls_golite062009 |
| 3'-5'-exoribonuclease activity | 6.46930372693262 | bayes_pls_golite062009 |
| 3'-5' exonuclease activity | 4.29895100594643 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 3.83939403332553 | bayes_pls_golite062009 |
| exonuclease activity | 3.40686901061667 | bayes_pls_golite062009 |
| transcription regulator activity | 3.24341202600661 | bayes_pls_golite062009 |
| RNA binding | 2.47373172667773 | bayes_pls_golite062009 |
| structural constituent of ribosome | 2.13956481798878 | bayes_pls_golite062009 |
| structural molecule activity | 1.95031459523051 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 1.71222144385878 | bayes_pls_golite062009 |
| nucleic acid binding | 1.45130233071198 | bayes_pls_golite062009 |
| binding | 1.38311294671926 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 1.35850109411274 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 1.35845277283398 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 1.35845277283398 | bayes_pls_golite062009 |
| 1.2099360907571 | bayes_pls_golite062009 | |
| exoribonuclease II activity | 1.18248519339188 | bayes_pls_golite062009 |
| transcription termination factor activity | 1.01993495617192 | bayes_pls_golite062009 |
| DNA binding | 1.01454217691792 | bayes_pls_golite062009 |
| hydrolase activity | 0.722411371082264 | bayes_pls_golite062009 |
| ATP-dependent peptidase activity | 0.66778558090199 | bayes_pls_golite062009 |
| carbohydrate kinase activity | 0.51810239718467 | bayes_pls_golite062009 |
| mRNA binding | 0.403794675006504 | bayes_pls_golite062009 |
| tRNA-specific ribonuclease activity | 0.383567539949931 | bayes_pls_golite062009 |
| ligase activity | 0.346041081217685 | bayes_pls_golite062009 |
| transcription factor activity | 0.298729064067577 | bayes_pls_golite062009 |
| protein binding | 0.292595239533272 | bayes_pls_golite062009 |
| aspartate-tRNA ligase activity | 0.151650064901878 | bayes_pls_golite062009 |
| translation initiation factor activity | 0.11625379846973 | bayes_pls_golite062009 |
| catalytic activity | 0.10089766806364 | bayes_pls_golite062009 |
| DNA-directed RNA polymerase activity | 0.0740938021136293 | bayes_pls_golite062009 |
| RNA polymerase activity | 0.0740938021136293 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.0287026367466632 | bayes_pls_golite062009 |
