| Protein: | gi|162319354, gi... |
| Organism: | synthetic construct |
| Length: | 885 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|162319354, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..885] | [1..885] |
|
|
0.0 | [118..885] | [140..907] |
|
|
0.0 | [129..885] | [80..836] |
|
|
0.0 | [116..885] | [1..770] |
|
|
0.0 | [125..885] | [1..761] |
|
|
0.0 | [231..885] | [98..752] |
|
Region A: Residues: [1-108] |
1 11 21 31 41 51
| | | | | |
1 MGCAPSIHVS QSGVIYCRDS DESSSPRQTT SVSQGPAAPL PGLFVQTDAA DAIPPSRASG 60
61 PPSVARVRRA RTELGSGSSA GSAAPAATTS RGRRRHCCSS AEAETQTC
|
| Detection Method: |  |
| Confidence: | 15.522879 |
| Match: | 2c2aA |
| Description: | Structure of the entire cytoplasmic portion of a sensor histidine kinase protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [109-394] |
1 11 21 31 41 51
| | | | | |
1 YTSVKQVSSA EVRIGPMRLT QDPIQVLLIF AKEDSQSDGF WWACDRAGYR CNIARTPESA 60
61 LECFLDKHHE IIVIDHRQTQ NFDAEAVCRS IRATNPSEHT VILAVVSRVS DDHEEASVLP 120
121 LLHAGFNRRF MENSSIIACY NELIQIEHGE VRSQFKLRAC NSVFTALDHC HEAIEITSDD 180
181 HVIQYVNPAF ERMMGYHKGE LLGKELADLP KSDKNRADLL DTINTCIKKG KEWQGVYYAR 240
241 RKSGDSIQQH VKITPVIGQG GKIRHFVSLK KLCCTTDNNK QIHKIH
|
| Detection Method: | |
| Confidence: | 9.69897 |
| Match: | 2gwrA |
| Description: | No description for 2gwrA was found. |
|
Region A: Residues: [395-499] |
1 11 21 31 41 51
| | | | | |
1 RDSGDNSQTE PHSFRYKNRR KESIDVKSIS SRGSDAPSLQ NRRYPSMARI HSMTIEAPIT 60
61 KVINIINAAQ ENSPVTVAEA LDRVLEILRT TELYSPQLGT KDEDP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [500-885] |
1 11 21 31 41 51
| | | | | |
1 HTSDLVGGLM TDGLRRLSGN EYVFTKNVHQ SHSHLAMPIT INDVPPCISQ LLDNEESWDF 60
61 NIFELEAITH KRPLVYLGLK VFSRFGVCEF LNCSETTLRA WFQVIEANYH SSNAYHNSTH 120
121 AADVLHATAF FLGKERVKGS LDQLDEVAAL IAATVHDVDH PGRTNSFLCN AGSELAVLYN 180
181 DTAVLESHHT ALAFQLTVKD TKCNIFKNID RNHYRTLRQA IIDMVLATEM TKHFEHVNKF 240
241 VNSINKPMAA EIEGSDCECN PAGKNFPENQ ILIKRMMIKC ADVANPCRPL DLCIEWAGRI 300
301 SEEYFAQTDE EKRQGLPVVM PVFDRNTCSI PKSQISFIDY FITDMFDAWD AFAHLPALMQ 360
361 HLADNYKHWK TLDDLKCKSL RLPSDS
|
| Detection Method: | |
| Confidence: | 113.0 |
| Match: | 1oynA |
| Description: | Catalytic domain of cyclic nucleotide phosphodiesterase pde4d |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| 3',5'-cyclic-nucleotide phosphodiesterase activity | 4.72905094107626 | bayes_pls_golite062009 |
| cyclic-nucleotide phosphodiesterase activity | 4.61245226349897 | bayes_pls_golite062009 |
| phosphoric diester hydrolase activity | 3.65984874547256 | bayes_pls_golite062009 |
| 3',5'-cyclic-AMP phosphodiesterase activity | 3.3591603098704 | bayes_pls_golite062009 |
| 3',5'-cyclic-GMP phosphodiesterase activity | 2.96981753811593 | bayes_pls_golite062009 |
| hydrolase activity | 1.22736412056595 | bayes_pls_golite062009 |
| catalytic activity | 1.07048165010262 | bayes_pls_golite062009 |
| binding | 0.994379083280533 | bayes_pls_golite062009 |
| phosphoric ester hydrolase activity | 0.511207383357891 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 0.432240759268351 | bayes_pls_golite062009 |
| protein binding | 0.162314119157812 | bayes_pls_golite062009 |
