| Protein: | gi|208967160 |
| Organism: | synthetic construct |
| Length: | 257 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|208967160.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-77 | [1..257] | [97..353] |
|
|
6.0E-77 | [1..257] | [95..351] |
|
|
5.0E-76 | [1..257] | [33..289] |
|
|
2.0E-75 | [1..257] | [24..280] |
|
|
4.0E-75 | [1..257] | [11..267] |
|
Region A: Residues: [1-257] |
1 11 21 31 41 51
| | | | | |
1 MYEQLKGEWN RKSPNLSKCG EELGRLKLVL LELNFLPTTG TKLTKQQLIL ARDILEIGAQ 60
61 WSILRKDIPS FERYMAQLKC YYFDYKEQLP ESAYMHQLLG LNLLFLLSQN RVAEFHTELE 120
121 RLPAKDIQTN VYIKHPVSLE QYLMEGSYNK VFLAKGNIPA ESYTFFIDIL LDTIRDEIAG 180
181 CIEKAYEKIL FTEATRILFF NTPKKMTDYA KKRGWVLGPN NYYSFASQQQ KPEDTTIPST 240
241 ELAKQVIEYA RQLEMIV
|
| Detection Method: |  |
| Confidence: | 2.72 |
| Match: | 1rz4A |
| Description: | Crystal Structure of Human eIF3k |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.76236644111948 | bayes_pls_golite062009 |
| hydrolase activity | 2.62777210765927 | bayes_pls_golite062009 |
| protein binding | 1.5114863464349 | bayes_pls_golite062009 |
| nucleic acid binding | 1.08079130332447 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.06350696248374 | bayes_pls_golite062009 |
| transcription repressor activity | 0.700922242779288 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.37240198519167 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.224432853777564 | bayes_pls_golite062009 |
| DNA binding | 0.180353635969032 | bayes_pls_golite062009 |
| transcription regulator activity | 0.147335771550418 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 0.142921675412538 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 0.124542865343065 | bayes_pls_golite062009 |
