| Protein: | gi|208965390 |
| Organism: | synthetic construct |
| Length: | 389 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|208965390.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-88 | [1..389] | [219..628] |
|
|
5.0E-85 | [1..389] | [1..389] |
|
|
8.0E-85 | [1..389] | [1..389] |
|
|
9.0E-85 | [1..389] | [1..389] |
|
|
2.0E-84 | [1..389] | [1..389] |
|
|
2.0E-84 | [1..389] | [1..389] |
|
|
4.0E-84 | [1..389] | [1..389] |
|
|
9.0E-84 | [1..389] | [1..389] |
|
Region A: Residues: [1-284] |
1 11 21 31 41 51
| | | | | |
1 MPLENLEEEG LPKNPDLRIA QLRFLLSLPE HRGDAAVRDE LMAAVRDNNM APYYEALCKS 60
61 LDWQIDVDLL NKMKKANEDE LKRLDEELED AEKNLGESEI RDAMMAKAEY LCRIGDKEGA 120
121 LTAFRKTYDK TVALGHRLDI VFYLLRIGLF YMDNDLITRN TEKAKSLIEE GGDWDRRNRL 180
181 KVYQGLYCVA IRDFKQAAEL FLDTVSTFTS YELMDYKTFV TYTVYVSMIA LERPDLREKV 240
241 IKGAEILEVL HSLPAVRQYL FSLYECRYSV FFQSLAVVEQ EMKK
|
| Detection Method: |  |
| Confidence: | 2.47 |
| Match: | 2ifuA |
| Description: | No description for 2ifuA was found. |
|
Region A: Residues: [285-389] |
1 11 21 31 41 51
| | | | | |
1 DWLFAPHYRY YVREMRIHAY SQLLESYRSL TLGYMAEAFG VGVEFIDQEL SRFIAAGRLH 60
61 CKIDKVNEIV ETNRPDSKNW QYQETIKKGD LLLNRVQKLS RVINM
|
| Detection Method: | |
| Confidence: | 11.154902 |
| Match: | 1ufmA |
| Description: | Solution structure of the PCI domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 3.50995556050336 | bayes_pls_golite062009 |
| nucleic acid binding | 3.38144578566524 | bayes_pls_golite062009 |
| binding | 3.33026160538031 | bayes_pls_golite062009 |
| DNA binding | 3.30822066787723 | bayes_pls_golite062009 |
| transcription factor activity | 2.60537570879007 | bayes_pls_golite062009 |
| hydrolase activity | 2.30467124306022 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.32971938164691 | bayes_pls_golite062009 |
| transcription activator activity | 1.08566311616647 | bayes_pls_golite062009 |
| transcription repressor activity | 0.95491822926452 | bayes_pls_golite062009 |
| protein binding | 0.653872239015235 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.505349137311395 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.42135864069093 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 0.136726704233672 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 0.118016217031359 | bayes_pls_golite062009 |
