YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|190562029, gi...
Organism:	Bacillus anthracis Tsiankovskii-I
Length:	269 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190562029, gi....

Description	E-value	Query Range	Subject Range
gi\|229192695, gi... - gi\|229192695\|ref\|ZP_04319654.1\| Glutamate racemase [Bacillus cereus ATCC 10876], gi\|228590785\|gb\|EEK... gi\|229180762, gi... - gi\|229180762\|ref\|ZP_04308100.1\| Glutamate racemase [Bacillus cereus 172560W], gi\|228602740\|gb\|EEK602... gi\|229147053, gi... - gi\|229147053\|ref\|ZP_04275413.1\| Glutamate racemase [Bacillus cereus BDRD-ST24], gi\|228636441\|gb\|EEK9... gi\|29898133, gi\|... - gi\|30022575\|ref\|NP_834206.1\| glutamate racemase [Bacillus cereus ATCC 14579], gi\|29898133\|gb\|AAP1140... MURI_BACC4 - Glutamate racemase OS=Bacillus cereus (strain B4264) GN=murI PE=3 SV=1 MURI_BACC2 - Glutamate racemase OS=Bacillus cereus (strain G9842) GN=murI PE=3 SV=1 gi\|206735485, gi... - gi\|206969797\|ref\|ZP_03230751.1\| glutamate racemase [Bacillus cereus AH1134], gi\|206735485\|gb\|EDZ5265... gi\|228671519, gi... - gi\|229111955\|ref\|ZP_04241499.1\| Glutamate racemase [Bacillus cereus Rock1-15], gi\|228671519\|gb\|EEL26... gi\|228711160, gi... - gi\|229072001\|ref\|ZP_04205211.1\| Glutamate racemase [Bacillus cereus F65185], gi\|228711160\|gb\|EEL6312... gi\|228723187, gi... - gi\|229048200\|ref\|ZP_04193769.1\| Glutamate racemase [Bacillus cereus AH676], gi\|228723187\|gb\|EEL74563... gi\|228849377, gi... - gi\|228910317\|ref\|ZP_04074134.1\| Glutamate racemase [Bacillus thuringiensis IBL 200], gi\|228849377\|gb...	8.0E-82	[1..269]	[1..269]
MURI_BACCZ - Glutamate racemase OS=Bacillus cereus (strain ZK / E33L) GN=murI PE=3 SV=1	1.0E-81	[1..269]	[1..269]
gi\|75760743, gi\|... - gi\|75760743\|ref\|ZP_00740765.1\| Glutamate racemase [Bacillus thuringiensis serovar israelensis ATCC 3...	2.0E-81	[1..269]	[6..274]
gi\|217961978, gi... - gi\|217961978\|ref\|YP_002340548.1\| glutamate racemase [Bacillus cereus AH187], gi\|217068220\|gb\|ACJ8247... gi\|206975961, gi... - gi\|206975961\|ref\|ZP_03236871.1\| glutamate racemase [Bacillus cereus H3081.97], gi\|206745713\|gb\|EDZ57... gi\|221242004, gi... - gi\|222097946\|ref\|YP_002532003.1\| glutamate racemase [Bacillus cereus Q1], gi\|221242004\|gb\|ACM14714.1... MURI_BACC1 - Glutamate racemase OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=murI PE=2 SV=2 gi\|229141225, gi... - gi\|229141225\|ref\|ZP_04269764.1\| Glutamate racemase [Bacillus cereus BDRD-ST26], gi\|228642266\|gb\|EEK9...	2.0E-81	[1..269]	[1..269]
gi\|163942231, gi... - gi\|89205282\|ref\|ZP_01183853.1\| Glutamate racemase [Bacillus weihenstephanensis KBAB4], gi\|89156766\|g...	7.0E-81	[3..269]	[1..267]
gi\|152025656, gi... - gi\|89200333\|ref\|ZP_01179087.1\| Glutamate racemase [Bacillus cereus subsp. cytotoxis NVH 391-98], gi\|...	6.0E-80	[3..269]	[1..267]
gi\|39998014, gi\|... - gi\|39998014\|ref\|NP_953965.1\| glutamate racemase [Geobacter sulfurreducens PCA], gi\|39984959\|gb\|AAR36...	1.0E-79	[5..269]	[4..268]
gi\|127765628, gi... - gi\|153190644\|ref\|ZP_01938007.1\| glutamate racemase [Listeria monocytogenes J2818], gi\|127765628\|gb\|E... gi\|133727519, gi... - gi\|254872801\|ref\|ZP_05245511.1\| glutamate racemase [Listeria monocytogenes FSL N1-017], gi\|153166592... gi\|153174316, gi... - gi\|254828597\|ref\|ZP_05233284.1\| glutamate racemase [Listeria monocytogenes FSL N3-165], gi\|153174316... gi\|153179317, gi... - gi\|254936234\|ref\|ZP_05267931.1\| glutamate racemase [Listeria monocytogenes F6900], gi\|153179317\|ref\|... gi\|254932885, gi... - gi\|254932885\|ref\|ZP_05266244.1\| glutamate racemase [Listeria monocytogenes HPB2262], gi\|153201942\|re... MURI_LISMC - Glutamate racemase OS=Listeria monocytogenes serotype 4b (strain CLIP80459) GN=murI PE=3 SV=1 MURI_LISMC - Glutamate racemase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=murI PE=3 SV=1 gi\|254823509 - gi\|254823509\|ref\|ZP_05228510.1\| glutamate racemase [Listeria monocytogenes FSL J1-194] gi\|254852894 - gi\|254852894\|ref\|ZP_05242242.1\| glutamate racemase [Listeria monocytogenes FSL R2-503] gi\|254878575 - gi\|254878575\|ref\|ZP_05251285.1\| glutamate racemase [Listeria monocytogenes FSL J2-071] gi\|254993152 - gi\|254993152\|ref\|ZP_05275342.1\| glutamate racemase [Listeria monocytogenes FSL J2-064] gi\|255025221 - gi\|255025221\|ref\|ZP_05297207.1\| glutamate racemase [Listeria monocytogenes FSL J2-003] gi\|255522515 - gi\|255522515\|ref\|ZP_05389752.1\| glutamate racemase [Listeria monocytogenes FSL J1-175] gi\|224503808 - gi\|224503808\|ref\|ZP_03672115.1\| glutamate racemase [Listeria monocytogenes FSL R2-561] gi\|224499092 - gi\|224499092\|ref\|ZP_03667441.1\| glutamate racemase [Listeria monocytogenes Finland 1988] MURI_LISMO - Glutamate racemase OS=Listeria monocytogenes GN=murI PE=1 SV=1 gi\|47097378, gi\|... - gi\|47097378\|ref\|ZP_00234930.1\| glutamate racemase [Listeria monocytogenes str. 1/2a F6854], gi\|47014... MURI_LISMF - Glutamate racemase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=murI PE=3 SV=1 gi\|126942573, gi... - gi\|254898602\|ref\|ZP_05258526.1\| glutamate racemase [Listeria monocytogenes J0161], gi\|153184602\|ref\|... MURI_LISMO - Glutamate racemase OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=murI PE=1... gi\|153196014, gi... - gi\|254830009\|ref\|ZP_05234664.1\| glutamate racemase [Listeria monocytogenes 10403S], gi\|153196014\|ref...	2.0E-79	[3..266]	[1..264]
MURI_LISIN - Glutamate racemase OS=Listeria innocua serovar 6a (strain CLIP 11262) GN=murI PE=3 SV=1 MURI_LISIN - Glutamate racemase OS=Listeria innocua GN=murI PE=3 SV=1	2.0E-79	[3..266]	[1..264]

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Predicted Domain #1

Region A:
Residues: [1-269]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLNRAIGVI DSGVGGLTVA KELIRQLPKE RIIYLGDTAR CPYGPRSREE VRQFTWEMTE  60
   61 HLLDLNIKML VIACNTATAV VLEEMQKQLP IPVVGVIHPG SRTALKVTNT YHVGIIGTIG 120
  121 TVKSGAYEEA LKSINNRVMV ESLACPPFVE LVESGNFESE MAYEVVRETL QPLKNTDIDT 180
  181 LILGCTHYPI LGPVIKQVMG DKVQLISSGD ETAREVSTIL YHSKMLNEGE EQSDHLFLTT 240
  241 GKIGLFKEIA SKWFGQPIEN VKHIHLEKE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	82.0
Match:	2gzmA
Description:	No description for 2gzmA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits