| Protein: | PNP_STRP1 |
| Organism: | Streptococcus pyogenes serotype M1 |
| Length: | 710 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PNP_STRP1.
| Description | E-value | Query Range |
Subject Range |
|
|
707.0 | [0..1] | [707..1] |
|
Region A: Residues: [1-710] |
1 11 21 31 41 51
| | | | | |
1 MSKQTFTTTF AGKPLVVEVG QVAKQANGAT VVRYGDSTVL TAAVMSKKMA TGDFFPLQVN 60
61 YEEKMYAAGK FPGGFMKREG RPSTDATLTA RLIDRPIRPM FAEGFRNEVQ VINTVLSYDE 120
121 NASAPMAAMF GSSLALSISD IPFNGPIAGV QVGYIDGEFI INPDKEQMEA SLLELTVAGS 180
181 KEAINMVESG AKELSEDIML EALLKGHQAI QELIAFQEQI VAVVGKEKAE VELLQVDVDL 240
241 QADIVAKYNA QLQKAVQVEE KKAREAATEA VKEMVKAEYE ERYAEDENLA TIMRDVAEIL 300
301 EQMEHAEVRR LITEDKIRPD GRKIDEIRPL DAVVDFLPKV HGSGLFTRGQ TQALSVLTLA 360
361 PMGETQIIDG LAPEYKKRFL HHYNFPQYSV GETGRYGAAG RREIGHGALG ERALEQVLPS 420
421 LEEFPYAIRL VAEVLESNGS SSQASICAGT LALMAGGVPI KAPVAGIAMG LISDGTNYTV 480
481 LTDIQGLEDH FGDMDFKVAG TREGITALQM DIKIAGITPQ ILEEALAQAK KARFEILDVI 540
541 EATIAEPRPE LAPTAPKIDT IKIDVDKIKV VIGKGGETID KIIAETGVKI DIDDEGNVSI 600
601 YSSDQAAIDR TKEIIAGLVR EAKVGEVYHA KVVRIEKFGA FVNLFDKTDA LVHISEIAWT 660
661 RTTNVSDVLE VGEDVDVKVI KIDEKGRVDA SMKALIPRPP KPEKKEEKHD
|
| Detection Method: |  |
| Confidence: | 150.0 |
| Match: | 1e3hA |
| Description: | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 1 and 4; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 6; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 2 and 5 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ribonuclease activity | 3.62650207668685 | bayes_pls_golite062009 |
| transcription regulator activity | 2.64513435028798 | bayes_pls_golite062009 |
| exoribonuclease activity | 2.49584565422948 | bayes_pls_golite062009 |
| 3'-5'-exoribonuclease activity | 2.48625785660839 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 2.46667410843173 | bayes_pls_golite062009 |
| RNA binding | 1.96263727771326 | bayes_pls_golite062009 |
| nucleic acid binding | 1.06121115244578 | bayes_pls_golite062009 |
| transcription termination factor activity | 1.01993495617192 | bayes_pls_golite062009 |
| binding | 0.953779727473657 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.82905129800799 | bayes_pls_golite062009 |
| ATP-dependent peptidase activity | 0.66778558090199 | bayes_pls_golite062009 |
| structural molecule activity | 0.61730676636766 | bayes_pls_golite062009 |
| carbohydrate kinase activity | 0.51810239718467 | bayes_pls_golite062009 |
| DNA binding | 0.42372608430605 | bayes_pls_golite062009 |
| 0.416217645025381 | bayes_pls_golite062009 | |
| hydrolase activity | 0.355379071501158 | bayes_pls_golite062009 |
| catalytic activity | 0.10089766806364 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.0287026367466632 | bayes_pls_golite062009 |
