| Protein: | CDC16_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 543 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CDC16_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
359.0 | [0..1] | [542..7] |
|
Region A: Residues: [1-447] |
1 11 21 31 41 51
| | | | | |
1 MREEEIEKIR GVVRDCVSKH LYSSAIFFAD KVAALTNDPS DIYMQAQALF LGRHYRRAFH 60
61 LLNASKIVLR DLRFRYLAAK CLEELKEWDQ CLLMLGDAKV DDDGIVYDAK DGNVIDFDKD 120
121 GEDREINISS AICFLRGKAY GALQNRSQAR QWYKAAIKAD PLCYEALECL IESHMLTSEE 180
181 ESSLLSSLQF SPEDGWLSSF YSCLIKKYDK ESTVELKFKK LENETSGSVS GSSMITLANN 240
241 TDLLACKAEY YHQCCEYQKC FELTAALLEK DPFHLKCTLV HLAAAMELGN SNELYLMACN 300
301 LVKDYPSKAL SWFAVGCYYY CIKKYAEARR YFSKATGIDG SFSPARIGYG NSFAAQEEGD 360
361 QAMSAYRTAA RLFPGCHLPT LYIGMEYMRT HSYKLADQFF MQAKAICPSD PLVYNELGVV 420
421 AYHMKEYGKA VRWFEKTLAH IPSALTE
|
| Detection Method: |  |
| Confidence: | 5.0 |
| Match: | 2ooeA |
| Description: | No description for 2ooeA was found. |
| Term | Confidence | Notes |
| binding | 2.71974493738804 | bayes_pls_golite062009 |
| protein binding | 1.6279032205159 | bayes_pls_golite062009 |
| hydrolase activity | 0.73439282112774 | bayes_pls_golite062009 |
| transcription regulator activity | 0.584434683111562 | bayes_pls_golite062009 |
| enzyme binding | 0.44905827271946 | bayes_pls_golite062009 |
| nucleic acid binding | 0.41706917101675 | bayes_pls_golite062009 |
| DNA binding | 0.31557320489611 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 0.244038930707726 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 0.215617899962405 | bayes_pls_golite062009 |
|
Region A: Residues: [448-543] |
1 11 21 31 41 51
| | | | | |
1 SWEPTVVNLA HAYRKLRKDR EAISYYERAL TLSTKSLSTY SGLAYTYHLQ GNFSAAISYY 60
61 HKALWLKPDD QFCTEMLNVA LMDECQNGVD SKVELC
|
| Detection Method: | |
| Confidence: | 59.0 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
